Gene Smed_1273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1273 
Symbol 
ID5322120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1366425 
End bp1367006 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content62% 
IMG OID640790214 
ProductErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_001326958 
Protein GI150396491 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.14942 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAACG ATCGCATCAC GCGCCGGGTA CTCGTGCTGG GTAGCCTGGC CCTCTTGGCC 
TCTGGCTGTG GCTCATTGCG AACGGCCGAC AGGCCGCAAA CGGCCAGGAC CCGTATAGAT
CCGCGATTCC GCAGGCAGCA AGTCGCCTAT CCTGGCGGCG AAGCCCCTGG AACGATCGTC
GTCAATACGG CGGAACGATA TCTCTATTAC GTTCAAGGAG GAGGCTCGGC GATTCGCTAC
GGCATCGGCG TAGGGGAGGA AGGCCGCACG CTCAAAGGCA GGGCGAAGAT CGGCCGCAAG
GCAGAATGGC CTTCCTGGAC GCCGACCGCG AATATGATTC GCCTCAAGCC GCATCTGGCG
CAATATGCCG GCGGCGTAAG CGGTGGACTT CACAATCCGC TCGGAGCCGC CGCCCTCTAT
CTTTATCGCG GCGGAAACGA CACCATGTTC CGGCTGCACG GAACGAACGA GCCCTGGAGC
ATCGGCCAGG CCGTATCGAG CGGTTGCATC CGTTTGACGA ACGAGGATAT CGTCGATCTT
TACAGCCGTA CCCCGGTGGG CACGGCGGTA CTGATCGTTT GA
 
Protein sequence
MENDRITRRV LVLGSLALLA SGCGSLRTAD RPQTARTRID PRFRRQQVAY PGGEAPGTIV 
VNTAERYLYY VQGGGSAIRY GIGVGEEGRT LKGRAKIGRK AEWPSWTPTA NMIRLKPHLA
QYAGGVSGGL HNPLGAAALY LYRGGNDTMF RLHGTNEPWS IGQAVSSGCI RLTNEDIVDL
YSRTPVGTAV LIV