Gene Smed_1270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1270 
Symbol 
ID5322117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1363797 
End bp1364582 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content62% 
IMG OID640790211 
Producthypothetical protein 
Protein accessionYP_001326955 
Protein GI150396488 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.282242 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGGCC GAGCCCTCAA GCTTTCAGCG TCTCGGCGCC TCGTCGGGGA TCTGATGCGG 
TTTTCGATGA AGGTGCCGCG GGTGAGCGTG CAGCGGCGGA TGCAACTCGG ACCGCTGCTC
AAGGCCCGAG CATCGCTTGA GACGAGGCCG TCCTGGACAG CGCTCTTCCT CAAGGGATAC
GCCCTTCTCG CTCAGGAGAC TCCTGAATTG CGGCGGGCCT ACGTCAAATT TCCCAAACCG
CAGCTCTATG AGTATCCGGG AAGTGTGGCA TCAATTGCGC ATGAACGGGA ATACGAGGGC
GAGCGGGTCG TCCTGCTGAC GACGATCAAA AACCCCGAGC GGCGTTCGAT CGCCGAACTG
GGGGCGTTGA TGCAGGCCGC GCGAACCAGT CCGGTGCTAG AGGTCAAGGA GTTCCGCCGC
GCCTTGAAGA TCGCCCGCCT CCCCGGCCCG ATCAGATGGC TTCTCATGTG GCTCGGCTTG
AATATCGGTC GGCAAAGAGC GCGCCGATTC GGCACCTTTC AGCTCTCGGT CTATTCGGGC
CTGGGGGCGG AATCACTTAA TCCCCTGACG CCTTTGACCT CCCTTCTCAA TTACGGCCCG
ATCGACGTGG ACGGCGGGGT GACCGTGCGG ATCCACTATG ACCACAGAGT CATGGACGGC
GCGAATGTCG CGCGTGCCCT TGAGAGGTTC GAACGGATAC TGAACGGGGA AGTCACCACA
GAGTTGGAAG CATTCGAAGG CGGACGTGAG ATCACCGCTG CAGCGGCGTC CGGAACGGCG
CGATGA
 
Protein sequence
MRGRALKLSA SRRLVGDLMR FSMKVPRVSV QRRMQLGPLL KARASLETRP SWTALFLKGY 
ALLAQETPEL RRAYVKFPKP QLYEYPGSVA SIAHEREYEG ERVVLLTTIK NPERRSIAEL
GALMQAARTS PVLEVKEFRR ALKIARLPGP IRWLLMWLGL NIGRQRARRF GTFQLSVYSG
LGAESLNPLT PLTSLLNYGP IDVDGGVTVR IHYDHRVMDG ANVARALERF ERILNGEVTT
ELEAFEGGRE ITAAAASGTA R