| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1268 |
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| Symbol | tgt |
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| ID | 5322115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1361678 |
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| End bp | 1362808 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640790209 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | YP_001326953 |
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| Protein GI | 150396486 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.236624 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAG CGTTTCAATT CAAACTGCTT TCAAGTGACG GCAATGCACG CCGCGGCGAG
GTCTTGACGC CTCGCGGGAC GATCCGCACG CCAGCCTTCA TGCCGGTCGG CACCGTCGGC
ACCGTCAAGG CGATGTATCT CGACCAGGTC CGCGAGCTGG GTGCGGATAT CATTCTGGGC
AATACTTATC ACCTGATGCT GCGCCCGGGG GCCGAGCGCG TCGCCCGGCT CGGCGGTCTG
CACAAGTTCA TCCGCTGGGA TAGACCGATC CTGACCGACA GCGGCGGATT CCAGGTCATG
TCGTTGTCGA GCTTGCGCAA GCTCAACGAA CAGGGCGTGA CCTTCAAGAG CCATGTCGAC
GGCGCGCTCT ATCATATGTC GCCGGAACGC TCGATCGAAA TACAAGGCTT GCTCGGCAGC
GATATTCAGA TGCAGCTCGA CGAATGCGTC GCGCTGCCGG CAGAACCCGG CGAAATCGAG
CGCGCCATGG AGATGTCGCT GCGCTGGGCC GAGCGCTGCA AGGTCGCCTT CGGCGACCAG
CCGGGCAAGG CGATGTTTGG CATCGTTCAG GGCGGCGATA TCCCCAAGCT GCGTGAACGC
TCGGCGTCGG CGCTCAACGA GCTCGACCTC AAGGGCTATG CGGTAGGCGG CCTCGCCGTC
GGTGAGCCGC AAGAGGTGAT GCTCGATATG CTCGACGTGA CTTGCCCTGT CCTGCCGGCC
GACAAACCAC GCTACCTTAT GGGCGTCGGC ACCCCGGACG ATATCCTGAA GTCGGTCGCC
CATGGTGTGG ATATGTTCGA CTGCGTCATG CCGACCCGCT CCGGCCGTCA CGGCCTCGCC
TTCACTCGCT ACGGCCGTAT CAACCTGCGT AATGCCCGAC ACGCGGAGGA TGCGCGCCCA
CTCGACGAAC AGTCCTCCTG TCCGGCGGCG CGCGACTATT CGCGCGCTTA CCTGCACCAC
CTGATTCGTT CAAACGAATC GCTTGGCGGG ATGCTGCTAA GCTGGAACAA TCTGGCCTAT
TATCAGGAGC TGATGGCCGG TATCCGCAAG GCGATCGAGG AAGGGCGCTA TTCCGATTTC
ATGGCGGAGA CCATCGAAGG CTGGCAGCGC GGCGATCTCG CCCCCGTGTA A
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| Protein sequence | MTEAFQFKLL SSDGNARRGE VLTPRGTIRT PAFMPVGTVG TVKAMYLDQV RELGADIILG
NTYHLMLRPG AERVARLGGL HKFIRWDRPI LTDSGGFQVM SLSSLRKLNE QGVTFKSHVD
GALYHMSPER SIEIQGLLGS DIQMQLDECV ALPAEPGEIE RAMEMSLRWA ERCKVAFGDQ
PGKAMFGIVQ GGDIPKLRER SASALNELDL KGYAVGGLAV GEPQEVMLDM LDVTCPVLPA
DKPRYLMGVG TPDDILKSVA HGVDMFDCVM PTRSGRHGLA FTRYGRINLR NARHAEDARP
LDEQSSCPAA RDYSRAYLHH LIRSNESLGG MLLSWNNLAY YQELMAGIRK AIEEGRYSDF
MAETIEGWQR GDLAPV
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