Gene Smed_1267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1267 
SymbolqueA 
ID5322114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1360595 
End bp1361677 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content63% 
IMG OID640790208 
ProductS-adenosylmethionine:tRNA ribosyltransferase-isomerase 
Protein accessionYP_001326952 
Protein GI150396485 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) 
TIGRFAM ID[TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.3665 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.863829 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTAG ACCTGTTTGA TTTCGACCTG CCGGAGGATT CCGTAGCGCT GAGGCCCGCA 
AGCCCGCGCG ATAGCGCCCG CATGCTCGTC GTTCGTCCCG GTGGCGAACC GGTTCTCGAG
GATCGTGGCG TCCTCGATCT GCCGTCGTTC CTGCGGCAAG GCGATGCGCT GGTCTTCAAT
GACACCAAGG TCATACCGGC GCAGCTCGAA GGCGTTCGCT ACCGGGGTGA GCATATCAGC
ACGCCCGTGT CGCTGACGTT GCATATGCGT GTTGCGCCTG ATCGCTGGAA AGCTTTCGCG
CGTCCGGCCC GCCGGCTGAA ACCCGGAGAC CGGGTCAGCT TCGGGCATGG CGGCAATGCC
TGCCTGCTCG GCTCGCTGGA CGCCATGGTC GAAGAGAAAG GCGATGCCGG CGAGGTGACG
CTTCGCTTCG ATCTCTCGGG TCCTTCGCTT GATGAAGCGA TCATGTCCGT CGGGCACATC
CCTCTGCCGC CTTACATTGC GTCCAAGCGT GCCGACGATG CGCGGGACCG GACCGATTAC
CAGACTGTCT ATGCGCGCGA GGAAGGCGCG GTGGCGGCGC CGACTGCGGG GCTGCATTTC
ACCGATCGCC TGTTCGCCAT GCTCGACGAG GCAGGCATTG AGCGGCATTT CGTCACGCTA
CACGTCGGGG CCGGTACATT CCTGCCGGTC AAGGCGGACG ATACCGACGA TCATGTGATG
CATGAGGAAA TCGGCCATGT CGATGCAGTA ACCGCGGCGA AGCTCAATGC AGTGCGGGAA
CGCGGGGGCC GTGTCGTCTG TGTCGGCACG ACATCGCTTC GGCTGGTCGA GAGCGCAGCC
GCCGAAGACG GCACTATACA TGCCTGGTCG GGCGCAACCG GCATTTTCAT CACCCCGGGC
TACCGCTTCC GCGCGGCCCA CATGCTGATG ACCAATTTTC ACCTGCCGAA ATCGACCCTG
TTCATGCTGG TCTCGGCCTT CGCGGGGCTC GAAACAATGC GCGACGCTTA TGCCCATGCG
ATCGCAACGG GGTACCGTTT CTATTCCTAT GGCGATTCGA GCCTGCTCTT CCGGAAAGAC
TAA
 
Protein sequence
MRVDLFDFDL PEDSVALRPA SPRDSARMLV VRPGGEPVLE DRGVLDLPSF LRQGDALVFN 
DTKVIPAQLE GVRYRGEHIS TPVSLTLHMR VAPDRWKAFA RPARRLKPGD RVSFGHGGNA
CLLGSLDAMV EEKGDAGEVT LRFDLSGPSL DEAIMSVGHI PLPPYIASKR ADDARDRTDY
QTVYAREEGA VAAPTAGLHF TDRLFAMLDE AGIERHFVTL HVGAGTFLPV KADDTDDHVM
HEEIGHVDAV TAAKLNAVRE RGGRVVCVGT TSLRLVESAA AEDGTIHAWS GATGIFITPG
YRFRAAHMLM TNFHLPKSTL FMLVSAFAGL ETMRDAYAHA IATGYRFYSY GDSSLLFRKD