| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1265 |
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| Symbol | |
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| ID | 5322112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1359393 |
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| End bp | 1359983 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640790206 |
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| Product | peptidyl-prolyl cis-trans isomerase cyclophilin type |
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| Protein accession | YP_001326950 |
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| Protein GI | 150396483 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.239562 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.798058 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCC TCCAATTCGC TGTTGCCGGA GCCTTGGCGC TCGCCACCTT CACGGGAGGC
GCCTTCTTTG CGGGAGGTGC CGTGGCGCAG TCTGGCGAAA ACATTCTCAC CGTTCAGCTC
AAGGACGGCC CCGTCGTCAT CGAGCTGCGT CCGGATATCG CTCCGAAGCA CGTGCAGCAG
ATCAAGGAAC TGGCCGCCGC CGGCGAATAT GACAATGTCG CGTTTCATCG CGTCATCAAG
GGCTTCATGG CCCAGACCGG CGACGTCGAG TTCGGCGACA TGAAGGACGG TTACCAGGCT
GATCGCGCCG GGACCGGTGG TTCGTCCAAG CCCGACCTCC CGGCCGAGTT CTCCGACGTT
CCTTTTGAGC GCGGTACGGT CGGAATGGCC CGAGCGCAGG ACCCGAACAG CGCGAATTCC
CAATTCTTCA TCATGCTCGC ACCCGGCGAC TTCCTCAATG GCCAGTACAC GGTCGTCGGC
AAGGTGGTGG AAGGCATGGA GAATGTCGAC AAGATCAAGC TCGGCGACGA CGCCAATAAT
GGTGCGGTTG CCGATCCAGA CCGCATAGTC AGCGTTAAGG TCGGCAGTTA G
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| Protein sequence | MKILQFAVAG ALALATFTGG AFFAGGAVAQ SGENILTVQL KDGPVVIELR PDIAPKHVQQ
IKELAAAGEY DNVAFHRVIK GFMAQTGDVE FGDMKDGYQA DRAGTGGSSK PDLPAEFSDV
PFERGTVGMA RAQDPNSANS QFFIMLAPGD FLNGQYTVVG KVVEGMENVD KIKLGDDANN
GAVADPDRIV SVKVGS
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