| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1264 |
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| Symbol | coaD |
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| ID | 5322111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1358823 |
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| End bp | 1359368 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640790205 |
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| Product | phosphopantetheine adenylyltransferase |
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| Protein accession | YP_001326949 |
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| Protein GI | 150396482 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0669] Phosphopantetheine adenylyltransferase |
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| TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain
[TIGR01510] pantetheine-phosphate adenylyltransferase, bacterial |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00933319 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.787413 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGCGGTTCG GCGCCGTCCA TGACAAAAGG CTTCACCAAA CGGAAACTGG CGCGATGACC
ACGGCTTTCT ATCCCGGCTC CTTCGATCCG ATCACCAACG GGCATCTCGA TGTACTCGTA
CAGGCATTGA ACGTCGCAGC GAAGGTCATC GTCGCGATAG GAGCCCATCC CGGCAAGGCG
CCGCTTTTCT CCTTCGATGA AAGGGCGGAC CTCATTCGTG CGGCCCTCGT GGAAACGCTA
CCGGAGAGGG CAGTGGACAT TTCCGTCGTA TCCTTCGACA ATCTGGTGGT CGATGCTGCG
CGAAAGCATG GCGCAAGGCT GCTCGTTCGA GGGCTTCGTG ACGGAACCGA CCTTGACTAC
GAAATGCAGA TGGCGGGCAT GAACCGGCAG ATGGCTCCCG ACATTCAGAC CCTCTTTCTG
CCGGCGGGTA CTGCCTCCCG GCCCATTACG GCCACATTGG TTCGGCAGAT CGCGGCCATG
GGCGGTGACG TCAGCGCTTT CGTCCCCGGC GCGGTTCATC AGGCGCTTCA GGCCAAGCGC
AAGTAA
|
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| Protein sequence | MRFGAVHDKR LHQTETGAMT TAFYPGSFDP ITNGHLDVLV QALNVAAKVI VAIGAHPGKA
PLFSFDERAD LIRAALVETL PERAVDISVV SFDNLVVDAA RKHGARLLVR GLRDGTDLDY
EMQMAGMNRQ MAPDIQTLFL PAGTASRPIT ATLVRQIAAM GGDVSAFVPG AVHQALQAKR
K
|
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