Gene Smed_1260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1260 
Symbol 
ID5322107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1353263 
End bp1354261 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content62% 
IMG OID640790201 
Productaldo/keto reductase 
Protein accessionYP_001326945 
Protein GI150396478 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.338475 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.972562 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATGA TTCCGCTCGG AAATTCCGGC CAGAAGGTAT CGTCGATCGG GCTCGGCTGC 
ATGGGCATGT CGGATCTGTA CGGTCCATCG GACCGCGCCG AAAGCATCGC CACCATTCAT
GCGGCAATCG ATGCGGGCAT CACCCTGTTG GACACCGGCG ACTTTTACGG CATGGGGCAT
AACGAGATGC TGATCGGGGA GGCGCTGAAG GGACGTCTTC GCGACCAGGT CCAGTTGAGT
GTCAAGTTCG GCGCATTGCG CGATGCGTCG GGCACATGGC TCGGCTACGA TGCACGGCCC
AAGGCGGTGC GCAACTTTCT CGCCTATACG CTGCAGCGCC TGGGAGTCGA CTATATCGAT
GTCTATCGCC CGGCCCGCCT CGATAGCGAT GTACCCATAG AGGATACCAT CGGCGCCATC
GCGGACTTGG TGAAGGCCGG CTACGTGCGC CATATCGGTC TCTCCGAAGT AGGCCCGCAA
AAGATAAGGC GCGCTGCCGC CGTTCACCCC ATCTCGGACC TGCAGATTGA ATATTCCCTG
ATTTCACGCG GCATTGAGGA TGAAATCGTG CCGGTGTGCC GCGAGCTCGG CATCGCCGTC
ACTGCCTATG GCGTGCTTTC GCGAGGCCTG ATCAGCGGCC ATTGGCAGAG GGGTGATGCG
AAGAGCGGCG ACTTCCGTGC GATGAGCCCC CGATTCCAGG AAGGAAATGT CGAGCGGAAC
CTCGCCTTGG TGGAGGCGCT CCGGCGCATC GCCGATGCCA AAGGCGTCAC CGTCGCGCAA
ATCGCCATTG CCTGGGTGGC CGCCCAGGGA GAGGACATCG TGCCTCTCAT CGGCGCGCGC
CGCCGGGATC GTCTCGCCGA AGCACTCGGT TCCCAGGCAG TTGACCTGGA TGCCGGCGAC
ATCTCTGCGA TCGAAAGCGC CGTGCCAAAG AACGCCGCTG CCGGCGCGCG CTATCCGGAA
GCGCAGCTTG TACACATGGA CAGCGAGCGG CAGAAATGA
 
Protein sequence
MRMIPLGNSG QKVSSIGLGC MGMSDLYGPS DRAESIATIH AAIDAGITLL DTGDFYGMGH 
NEMLIGEALK GRLRDQVQLS VKFGALRDAS GTWLGYDARP KAVRNFLAYT LQRLGVDYID
VYRPARLDSD VPIEDTIGAI ADLVKAGYVR HIGLSEVGPQ KIRRAAAVHP ISDLQIEYSL
ISRGIEDEIV PVCRELGIAV TAYGVLSRGL ISGHWQRGDA KSGDFRAMSP RFQEGNVERN
LALVEALRRI ADAKGVTVAQ IAIAWVAAQG EDIVPLIGAR RRDRLAEALG SQAVDLDAGD
ISAIESAVPK NAAAGARYPE AQLVHMDSER QK