| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1251 |
|---|
| Symbol | |
|---|
| ID | 5322098 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 1341477 |
|---|
| End bp | 1342508 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640790192 |
|---|
| Product | phosphatidylserine decarboxylase |
|---|
| Protein accession | YP_001326936 |
|---|
| Protein GI | 150396469 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.302501 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.631326 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTA TGCATATTCA CTTCGGCAAG GAAGGCGGAG CTGAGCGCTT CTTCGTCAAT
CTCGTCAATG CACTGCATGA GAGGGGCGTC GAACAACGGG CGCTGATCCG GCCGGACCGC
AGCTGGCGCA GGGACATAGA AAAGAGCGCG ACGATCTATG AAGGCGTTTT CCGGCGCATT
TCGCTGTCTC GTTTCCTTTT GAAATGGAGG TTGAACCAGG TTCTTCGCGA GTTCAAACCG
GACATCATAA TGGCGTGGCA GTTGCGGGCC AGCCGGTTCA TGCCGGCCCA TGCCAAGGCC
TATCGCATAT CTCGGCTGGG AGATTATCCC GAACATCTCG GTTACTACAC CAATGTCGAG
ACCCTCGTTT GCATCACGCC TGATATTGCC GCCAAGGTTC GCGATTTTGG CTGGAACCGC
GACATCGAGG TGATCGCTAA TTTCACCCGC GCAGAGCCTG TCCCGCCCGT TGCGCGGGCC
GATTTGCAGA CGCCGGAGGA TGCCTTCGTC GTGGTCGGAA TGGGACGCTT CGTGAAGCGA
AAGGGCTTCG ACGGGCTTAT CCGAGCAGTG AAACAAGTGG AGAACACCTA TCTGTGGCTC
GTCGGGGACG GTCCGGATAG AGAACAGCTC GAACGGCTCA CAGACGAACT CGGGCTTCGC
GATCGCGTCC GCTTCACCGG TTGGCAGACA AACGCCTATG GTTTTCTGTC GGCCGGCGAC
GCCTTCGTCA TCAATTCATC GCATGAGCCT CTCGGCAATG TCTGCTTCGA AGGATGGGGC
GCCGGAAAAC CCACGATAGC CGCACGCGCG GAGGGCCCGT CCTGGGTTAT GACGCATGAT
GGTGATGCTC TCATGGTCGA TTGCGGTGAC GACAGAGGGC TTGCCGAGGC CATCCGCCGG
CTGCGCGATG ATCCTGCGCT TCGCGAGCGA CTAAGCGCCG CCGGCCGCGA AACCCTGCGG
GCGCGCTTTT CCGAAAAGGC AATCACCGAC GCTTATCTCG ATCTTTTCGC CAGGAGCGTC
GCACGGCGAT GA
|
|---|
| Protein sequence | MKIMHIHFGK EGGAERFFVN LVNALHERGV EQRALIRPDR SWRRDIEKSA TIYEGVFRRI
SLSRFLLKWR LNQVLREFKP DIIMAWQLRA SRFMPAHAKA YRISRLGDYP EHLGYYTNVE
TLVCITPDIA AKVRDFGWNR DIEVIANFTR AEPVPPVARA DLQTPEDAFV VVGMGRFVKR
KGFDGLIRAV KQVENTYLWL VGDGPDREQL ERLTDELGLR DRVRFTGWQT NAYGFLSAGD
AFVINSSHEP LGNVCFEGWG AGKPTIAARA EGPSWVMTHD GDALMVDCGD DRGLAEAIRR
LRDDPALRER LSAAGRETLR ARFSEKAITD AYLDLFARSV ARR
|
|---|
| |