Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1245 |
Symbol | |
ID | 5322092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1335436 |
End bp | 1336557 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640790186 |
Product | NADH:flavin oxidoreductase/NADH oxidase |
Protein accession | YP_001326930 |
Protein GI | 150396463 |
COG category | [C] Energy production and conversion |
COG ID | [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.939474 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.298722 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTCTC TCTTTGACCC GATTTCGATC GGTGACATCG TACTCAAGAA CCGCGTCGTA ATGGCACCTC TGACCCGGAA CCGTTCGCCC CAGGCCGTGC CCAATGATCT CAACGTCGCC TATTACGAGC AGCGCGCATC CGCCGGCCTG CTGATCACCG AGGCGACGGC AATAAGTCAC CAGGGCCAGG GCTACGCAGA CGTGCCGGGC CTCTACAAGC CGGAAGCCCT AGCCGGCTGG CGCAAGATCA CCGATGCCGT TCACAAAGCC GGCGGCAGGA TCGTCGTGCA GATGTGGCAT GTCGGGCGGA TCTCGCATGA GTCGCTTCAG CCGCAGGGCG GCAAGCCTGT TGCGCCGTCG GCCATCCGTG CCAAATCGAA GACCTATCTG ATCAACCCCG ATGGAACCGG GACCTTTGCC GAAACCTCCG AACCGCGAGC GCTCGAATTG GCGGAAATCC CCGGCATCGT CGAGGATTAT TGCAAGGCCG CCCGCGCCGC GATCGAGGCG GGCTTCGATG GCGTCGAGAT TCATGCTGCC AACGGCTATC TGATCGACCA GTTCCTGCGC TCCGGCTCAA ACGAACGCAC GGACGCCTAT GGCGGCTCGA TCGAGAACCG CGCCCGCTTC CTCTTCGAGG TCGTAGACGC CGTTACCGGG GAGATCGGCG CCGGTCGGGT GGGAATCCGC ATCTCTCCCG TGACCCCTGC AAACGACGCT TTCGATCCGG ATCCGCAGCC CCTCTTCACC TATGTCGTCG AAGGACTGGC TCGTTACCCG CTCGCATATG TGCACGTCAT CGAAGGCGCC ACGGGCGGAG CACGCGATCA CCAGCAGGGC GATCGGCCCT TCGACTACGC AGCCCTGCGT AACGCCTATG CAGCAGCCGG GGGTAAGGCG GCCTGGATGA CGAACAACGG TTACGATCGC GATCTGGCGC TGAGGACCGT CGAAAGCGGC GAAGCCGACC TCGTTGCATT CGGCAAACCC TTCATCGCCA ACCCGGACCT CGTACGCCGG CTTAGAGACA ATGTGGCCCT GAATGCACCG GATCAGGCAA CCTTCTATGG CGGCGGTGCC AAAGGCTACA CGGACTATCC GTCGCTCGAA AACGTCGCCT GA
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Protein sequence | MASLFDPISI GDIVLKNRVV MAPLTRNRSP QAVPNDLNVA YYEQRASAGL LITEATAISH QGQGYADVPG LYKPEALAGW RKITDAVHKA GGRIVVQMWH VGRISHESLQ PQGGKPVAPS AIRAKSKTYL INPDGTGTFA ETSEPRALEL AEIPGIVEDY CKAARAAIEA GFDGVEIHAA NGYLIDQFLR SGSNERTDAY GGSIENRARF LFEVVDAVTG EIGAGRVGIR ISPVTPANDA FDPDPQPLFT YVVEGLARYP LAYVHVIEGA TGGARDHQQG DRPFDYAALR NAYAAAGGKA AWMTNNGYDR DLALRTVESG EADLVAFGKP FIANPDLVRR LRDNVALNAP DQATFYGGGA KGYTDYPSLE NVA
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