Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1234 |
Symbol | |
ID | 5322081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1318778 |
End bp | 1319581 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640790175 |
Product | hypothetical protein |
Protein accession | YP_001326919 |
Protein GI | 150396452 |
COG category | [S] Function unknown |
COG ID | [COG1801] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.595917 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.101491 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAGTT CGGGTAGGAT CCGTGCCGGT ATCGGCGGTT GGAATTTCGA ACCCTGGGAA GGCAGCTTCT ACCCGGATGG CCTTCCGAAG AAACGGCAGC TCGAATTTGC CGGCAAGGAA CTGCGGACGA TCGAGGTCAA CGGCACCTAT TACAGTTCGC AGAAGCCGGC GACCTTTGCC AAATGGGCGG CGGAGGTTCC GGACGGTTTC ATCTTTTCCC TGAAGGCCAG TCGCTTCGTG ACGAACCGCA AGATTCTCTC GGAAGCAGGC GAATCGATGG AGCGGTTTTT GACGCAGGGG CTTACCGAAC TCGGCGACCG CCTCGGGCCC ATCCTCTGGC AGTTCGCGCC GACCAAGAAG TTCGATGCGG AGGATTTCGA GGGATTTCTG AAGCTCCTGC CGGACAAGCA GGACGGCCTG AAGCTTCGCC ACGTGGTCGA GGTTCGCAAT CCCAGTTTCC AGGCGCCGGA GTTCGTGCAG CTCCTCGAAA AATACAAGGT GGCCGTCGCG CTCGCAGAGC ACGCGGACTA CCCGATGATT GCCGATGTCA CCACCGATTT CATCTATGCG CGTCTGCAGA AGGGGAGCGA CGAGGTGAAG AGCTGCTACC CGCCGAAGGA CCTCGACCAC TGGGCCAAGC GACTGAAGGC CTTTGCCGCC GGTGACGAGC CGGGGGATCT GGAGAAAAGC GCGCCGGCGC GCAAGCCGGA GAAGACGCCT CGCGACGTCT TTGCCTTCTT CATCACCTCA GGCAAGATCA ATGCGCCGAA CGGAGCAAGG GAATTGCAGA AGCGCGTGGA CTAG
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Protein sequence | MASSGRIRAG IGGWNFEPWE GSFYPDGLPK KRQLEFAGKE LRTIEVNGTY YSSQKPATFA KWAAEVPDGF IFSLKASRFV TNRKILSEAG ESMERFLTQG LTELGDRLGP ILWQFAPTKK FDAEDFEGFL KLLPDKQDGL KLRHVVEVRN PSFQAPEFVQ LLEKYKVAVA LAEHADYPMI ADVTTDFIYA RLQKGSDEVK SCYPPKDLDH WAKRLKAFAA GDEPGDLEKS APARKPEKTP RDVFAFFITS GKINAPNGAR ELQKRVD
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