Gene Smed_1228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1228 
Symbol 
ID5322075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1309461 
End bp1310042 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content54% 
IMG OID640790169 
Producthypothetical protein 
Protein accessionYP_001326913 
Protein GI150396446 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.067938 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.299662 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATTG CGACCCATCA GGCCAACGTC TCGAACCAGC AAAATGCACG CGCCGACGGA 
CCTATCGTCG GCCGCGATTA CTATAATGTC GAAGCCAAGA AGGGCTTGGT CGAGAAGCTG
CTGCATAAGC TGAAAGAGCA GTATGACTGC AACGAACAGA CGCAGACGAC GATAGACGAA
CTCGCACGGT ACCATACTCG TCGCGCCCCC GACGGCATTG ACGGTCTTGA AGCCAAGCTC
GAGGCCAGTG GGCGTTCCGC CTACTATGAC GACGCGATCG AGAAGAAGGA GATGTTCGCG
AAACTTCTCG AGAGATGGTC GCTGTACTCA TCCGCTCAGG AGATCTTCGT CCACGTCCTG
GCGAAGGCCG AGAATGAGTT TACCCAGGTA ATCTACGGCC AGATACCGAA AAAGGAACCC
GAAGAAATCA ATGCTATGGT CATCGACCGT ATCGTGAATC CTATCGTTGA GGAATGCGGT
GGCGACCTCA TAGCCGTGAA CCACAATCTG GTTCAAGGAA TGGTGTACTG GCTTGCTGAG
CAATGCTTCA TCAAGTGGCA TCATGGCGTG GTTGCCAGAT GA
 
Protein sequence
MNIATHQANV SNQQNARADG PIVGRDYYNV EAKKGLVEKL LHKLKEQYDC NEQTQTTIDE 
LARYHTRRAP DGIDGLEAKL EASGRSAYYD DAIEKKEMFA KLLERWSLYS SAQEIFVHVL
AKAENEFTQV IYGQIPKKEP EEINAMVIDR IVNPIVEECG GDLIAVNHNL VQGMVYWLAE
QCFIKWHHGV VAR