Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1206 |
Symbol | |
ID | 5322053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 1287909 |
End bp | 1289048 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640790147 |
Product | hypothetical protein |
Protein accession | YP_001326891 |
Protein GI | 150396424 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0604717 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.572121 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACCGA TTACGATCTT TGGATCCATC ATTATTGGAG CTGTATCTCT GCTGCCTCTT GGGGTCCTGC CGATCCTGCT CGGAGGGTTG AACGATGCCG GCCTATTGAG CAAGGCAGGC ATCGGCCAAG CGGCGACGCT CGAATTGCTC GGTCTGACAT TGGGGGCAAC TGTTGGCGGC TACTGGATGG CGCGGGGCGC CATGCGCCTG AAGACCGCTG CGACCGCGCT CGGATTGGTG GCGGTCAACG TTGCGAACGC ACACGCTGAA ACAACAGCCG CCGTGTTTCT CGACCGGGCA GCCGCAGGCC TGCTTGCGGG ACTTCTCTTT GGAGCTGCGA ATGCGATCAT AGTGCGTTCG AACAACCCCG ACAGGCTTAC CGGAATCCTC TGCGGCGCAT CTGTGGTGCC ACAGATCGGA CTGGCATATC TTTTCCCCGT TCTTCTGATC CCGACTTTCG GGGTGGCGGC AGGGCTATAC GCGCTCGCCG CCGGGGCGCT GATCGCAGCT CTCTTTGCTG TCACCCTTGT AGACAAGGTC GGCGTCCTGA AGCGCGCAGA GCGAACCGGA AATCGTTTCA GCGGAACGGT GATGTTGTAC GGGAGCGCGA CAATCCTTCA AGCCGCCGGG CTTGGTGCGG CTTGGACCTA TATCGAGCGC GTTGCAACTC AGCACGGTCT AGGCCCTTCT GTGATCGGCC TCGCTTTTTC TGCCAGTCTC GCCAGCCAGG TGGCCGCATC ATGGCTCTCG GCATGGCTCG TTCCGAGCAT GGCAAAATGG CCAGGCCTTT TAGTGCTTGT CCTGACGCAG GCCGGGTTCA TCGCGCTCGC CGTCCTCACC GATGCACCGA CGGCGTTCAT AGTTGCAATC TGCCTCTTTG CGAGCGCCGC ATGCGCGCTG CAGGCTTTTC AGATGGCCCA GATCGTCCGA CTTGACACGA CACGAAGAGC GGCCGTTCTC ATCTTGCCGA TGATCCTCTT TGGCAACGGG CTCGGTCCTT TGATCGCCTC GTTCGCCACG ACGGAAGTCG ATGTGCTTGG TGGCGGCTGG GCCGCCGTTG CCATGACTGC TGCATCGCTC CTTCTCTACG TCGTGTGCGC CTCGCGGTCG ACCCGGCAAA GGACTGCCTC CCACGCCTGA
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Protein sequence | MRPITIFGSI IIGAVSLLPL GVLPILLGGL NDAGLLSKAG IGQAATLELL GLTLGATVGG YWMARGAMRL KTAATALGLV AVNVANAHAE TTAAVFLDRA AAGLLAGLLF GAANAIIVRS NNPDRLTGIL CGASVVPQIG LAYLFPVLLI PTFGVAAGLY ALAAGALIAA LFAVTLVDKV GVLKRAERTG NRFSGTVMLY GSATILQAAG LGAAWTYIER VATQHGLGPS VIGLAFSASL ASQVAASWLS AWLVPSMAKW PGLLVLVLTQ AGFIALAVLT DAPTAFIVAI CLFASAACAL QAFQMAQIVR LDTTRRAAVL ILPMILFGNG LGPLIASFAT TEVDVLGGGW AAVAMTAASL LLYVVCASRS TRQRTASHA
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