Gene Smed_1206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1206 
Symbol 
ID5322053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1287909 
End bp1289048 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content61% 
IMG OID640790147 
Producthypothetical protein 
Protein accessionYP_001326891 
Protein GI150396424 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0604717 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.572121 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACCGA TTACGATCTT TGGATCCATC ATTATTGGAG CTGTATCTCT GCTGCCTCTT 
GGGGTCCTGC CGATCCTGCT CGGAGGGTTG AACGATGCCG GCCTATTGAG CAAGGCAGGC
ATCGGCCAAG CGGCGACGCT CGAATTGCTC GGTCTGACAT TGGGGGCAAC TGTTGGCGGC
TACTGGATGG CGCGGGGCGC CATGCGCCTG AAGACCGCTG CGACCGCGCT CGGATTGGTG
GCGGTCAACG TTGCGAACGC ACACGCTGAA ACAACAGCCG CCGTGTTTCT CGACCGGGCA
GCCGCAGGCC TGCTTGCGGG ACTTCTCTTT GGAGCTGCGA ATGCGATCAT AGTGCGTTCG
AACAACCCCG ACAGGCTTAC CGGAATCCTC TGCGGCGCAT CTGTGGTGCC ACAGATCGGA
CTGGCATATC TTTTCCCCGT TCTTCTGATC CCGACTTTCG GGGTGGCGGC AGGGCTATAC
GCGCTCGCCG CCGGGGCGCT GATCGCAGCT CTCTTTGCTG TCACCCTTGT AGACAAGGTC
GGCGTCCTGA AGCGCGCAGA GCGAACCGGA AATCGTTTCA GCGGAACGGT GATGTTGTAC
GGGAGCGCGA CAATCCTTCA AGCCGCCGGG CTTGGTGCGG CTTGGACCTA TATCGAGCGC
GTTGCAACTC AGCACGGTCT AGGCCCTTCT GTGATCGGCC TCGCTTTTTC TGCCAGTCTC
GCCAGCCAGG TGGCCGCATC ATGGCTCTCG GCATGGCTCG TTCCGAGCAT GGCAAAATGG
CCAGGCCTTT TAGTGCTTGT CCTGACGCAG GCCGGGTTCA TCGCGCTCGC CGTCCTCACC
GATGCACCGA CGGCGTTCAT AGTTGCAATC TGCCTCTTTG CGAGCGCCGC ATGCGCGCTG
CAGGCTTTTC AGATGGCCCA GATCGTCCGA CTTGACACGA CACGAAGAGC GGCCGTTCTC
ATCTTGCCGA TGATCCTCTT TGGCAACGGG CTCGGTCCTT TGATCGCCTC GTTCGCCACG
ACGGAAGTCG ATGTGCTTGG TGGCGGCTGG GCCGCCGTTG CCATGACTGC TGCATCGCTC
CTTCTCTACG TCGTGTGCGC CTCGCGGTCG ACCCGGCAAA GGACTGCCTC CCACGCCTGA
 
Protein sequence
MRPITIFGSI IIGAVSLLPL GVLPILLGGL NDAGLLSKAG IGQAATLELL GLTLGATVGG 
YWMARGAMRL KTAATALGLV AVNVANAHAE TTAAVFLDRA AAGLLAGLLF GAANAIIVRS
NNPDRLTGIL CGASVVPQIG LAYLFPVLLI PTFGVAAGLY ALAAGALIAA LFAVTLVDKV
GVLKRAERTG NRFSGTVMLY GSATILQAAG LGAAWTYIER VATQHGLGPS VIGLAFSASL
ASQVAASWLS AWLVPSMAKW PGLLVLVLTQ AGFIALAVLT DAPTAFIVAI CLFASAACAL
QAFQMAQIVR LDTTRRAAVL ILPMILFGNG LGPLIASFAT TEVDVLGGGW AAVAMTAASL
LLYVVCASRS TRQRTASHA