| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1192 |
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| Symbol | |
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| ID | 5322039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1273004 |
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| End bp | 1275226 |
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| Gene Length | 2223 bp |
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| Protein Length | 740 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640790133 |
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| Product | integrase, catalytic region |
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| Protein accession | YP_001326877 |
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| Protein GI | 150396410 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.155684 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.264871 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGCGA CCCTGCCGTT CAGGCTCACC GAGCTCGACC GGATCACCAT CGACGACGTG
GAATACGTTT TCGACTGTGA GCTGCCTGGC GAGACGATCT TCATCGACCG CTCATCCCGC
CGGGCCCGCC CCATCAAGAA CTCAGAGATC ATCGAGTTCC ACCACACGGA CCGCATGATC
GTTGAGCCCG GGTACTACCA CGCCAAGGCA ATCGAACGCC GCAGTGTGAT GACCGTCGAG
GCCTTGTCAC AGATTGGTGA CAAGAGCCTG GCGGATGCCA TGAACCGCAA GCTCTGGTGT
GATCTGGTAC TGCGTGCAAA GGCTGAGCGC AATGTCCGCC GCGAGGGCGG CATTGAACTA
ATGCTCGAGA AGATCGCAGC AGAGTACCGC GCTGCGAATG GCAAATCGAT CGCGAACAAT
GGCGGCAGGC TGCAGCAGTC CAACTCGCGA CCATTCGAAC TCACCCCGCC GCCGCTGCGG
ACGTTGAACG ACTGGCTTGG AAAGTACCGC AAGGCCGACT TCGATATCAG CGGCCTCATC
GACAAGTACA GCACCCAGTC AAAGGGAAAG ACGATCTTCA CAGACGAAGA GCGGAACCTG
CACGCTCGCT TCGTTCTCAA ATACGCCTCC CGCACGAAGC CTTCCATCCG ACACCTCCAT
CGTCGCATGA AGGCAACCTT CAACCGTATC AACAGGGGGC GTGGGCTGCC TCGCGGTGAG
GGTCTCAGGT GGATCTCGGA AACCTATCTC CGAGAGAAGA TCAATGAACT GCCGGACTTC
TTCAAGATGA CTGGACGGGA GGGAGAGCGG AAAGCCCGCC TCTACTACCA GATCGTGCGC
CAGGGCGCGA GCAAGGGGAT TCCTTTGCAG CGCGTCGAAG CTGACGAATA CCACGTGGAT
CTCCAGACGA TCCTTGTCGA CACCATCGTT TGGAAGGAAC TCACGCCAGA GCAGAGGCGC
GCGCTCTCCA CAGTACGCCT GTGGTTCTCC GGGGTGATCG ACGTAGCAAC GAAGTGCATC
CTGGCTTTCC GTGTCTTCGT CGAGGATCCC AAGATCGAAT CCGCTCTTGC GACGTTCGAT
ATGACCACCC GCGACAAGAC TGCCCTGGCG AAGGCGGCCG GTTGCAAGTT CCCCTGGGAA
ATGTGCGGCC AGATCCAGTC GGCCGGAATG GACTCCGCGA CCTGGTTCGT CGCCGACGCG
GTGAAGGGCG CGCTGCACGA TGCCGGTTGC ACGACAGTCT ATCCTCCATC CGGCGAACCC
TACCTTCGTG GAACGATCGA GCGCTTCTTT CGCACCATCG CATTCCTTGG ACTTCAGGAT
TTCTGCGGCC GGACCTTCGG CAACGTCGTC GAGAAGGGGG ATGCGAAGCC CGAGCAGGAG
GCCGTCATCC GTACCGATCT CCTGGCCCAG ATTTTCACGC GTCTGATCGT GGACGTGTAT
CACAACACCC CGCATACCGG GCTGTGGGGC GCGACGCCGC GCCAGGCATG GCTGGAACTT
ACCAAAGAAC ACAAGCCCGC TCCGGCGCCT GTCGGGTATC TTCGCCGTAA CATCTACGGC
ACCCCCGCTG TGCGCAAGAT CACCAAGGAA GGCATCGTCA ACGACTACAT CCAGTACCAG
TCGCTGGCGA TCCAGCAAAT CAGGCGGGAC GACACCGATA TCGACATCGA CATCAAGTAC
GATCGCTTCG ATCTTTCCGA GATCACGCTG ATCTGGAAAG ACGGAGTGCT TCGTGTTCCG
GCAACGCTGC CTGGCTTGAA GAACGTGACC ATCTGGCAGT GGGCGGCTGC CAAGAAGCGG
CTCAGGATCG AAGACCGCGA AAATCTTCTT CTAACAGAAG ATGCCATCGC CGACGCGCTC
GAGTGGGCGG CCCAGCAGCA CGAAACCTCG CTTGAGGAGC TTGAACGGGC TTCGCCCATT
CTCACCGACG AACGGTATCA TCTGACCAAC GATCACCGCG AGCGTTTCAT CCGAACTGCG
GACACCCGAT CGCCGGAGGC CGTGGCTGTC CGGCAGCAGG CTCCGGACGT TCCCGAACTG
GCGCTTCTCT TCGGTCGCGC CGCGGCTCCA ATCGCGAACG CTCCGGAGGT GGCCAAGCCC
GATCGCACGC TTCGCGAGAC GAATGTGCCG AAGCGGGAAA AAGTCCGCAA GGCGAACCAG
CAGAATTCGG CCGCCGATGA GGCCGCCGTC CCGCCGGACG ATGAATTCGG AATCCTCGAC
TGA
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| Protein sequence | MHATLPFRLT ELDRITIDDV EYVFDCELPG ETIFIDRSSR RARPIKNSEI IEFHHTDRMI
VEPGYYHAKA IERRSVMTVE ALSQIGDKSL ADAMNRKLWC DLVLRAKAER NVRREGGIEL
MLEKIAAEYR AANGKSIANN GGRLQQSNSR PFELTPPPLR TLNDWLGKYR KADFDISGLI
DKYSTQSKGK TIFTDEERNL HARFVLKYAS RTKPSIRHLH RRMKATFNRI NRGRGLPRGE
GLRWISETYL REKINELPDF FKMTGREGER KARLYYQIVR QGASKGIPLQ RVEADEYHVD
LQTILVDTIV WKELTPEQRR ALSTVRLWFS GVIDVATKCI LAFRVFVEDP KIESALATFD
MTTRDKTALA KAAGCKFPWE MCGQIQSAGM DSATWFVADA VKGALHDAGC TTVYPPSGEP
YLRGTIERFF RTIAFLGLQD FCGRTFGNVV EKGDAKPEQE AVIRTDLLAQ IFTRLIVDVY
HNTPHTGLWG ATPRQAWLEL TKEHKPAPAP VGYLRRNIYG TPAVRKITKE GIVNDYIQYQ
SLAIQQIRRD DTDIDIDIKY DRFDLSEITL IWKDGVLRVP ATLPGLKNVT IWQWAAAKKR
LRIEDRENLL LTEDAIADAL EWAAQQHETS LEELERASPI LTDERYHLTN DHRERFIRTA
DTRSPEAVAV RQQAPDVPEL ALLFGRAAAP IANAPEVAKP DRTLRETNVP KREKVRKANQ
QNSAADEAAV PPDDEFGILD
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