Gene Smed_1191 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1191 
Symbol 
ID5322038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1271904 
End bp1272986 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content63% 
IMG OID640790132 
Producthypothetical protein 
Protein accessionYP_001326876 
Protein GI150396409 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.360299 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.2185 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA AGAATCTATC GCCAGCCCTC GTCGAGGCAC TTTCGCGCGT CCGGCAGTCG 
ATGTCAGCGG ATCAGACCGC CCTTGCCGAC CGCATGGCCA CCATCAACGC GCGTCACCTG
AAGACTTTCC GTGACGACGC GTTTGCCGCT CATGTCGATC GCATGAAGCG CGGCCTTGTC
GCGCACTATT CGGGCGACGA GAAGCAGTAC CGCATGATCC TTGTCGTGGG GTCCTCCCAC
TCGGGAAAGT CGACTCTGGT GGAGCACGCC CTCGACAATG ACCCGGCGTT CCATTCCTAT
GTCGATAGCG AAGGCACGGA GACCGTGCCG GTGCTCCGCT TTCAGGCGCC CTCGCCCTGT
ACGCTGCGCA ATCTCGCAGT CGACGGCCTG GAAGCTCTTG GTTTTCCCGT GAAGAGCGAC
ATCGTCGAAA GCCGGGCCTG GCCGCTTTTC CGCCAGCAGC TCAAGCATCG CAAGGTGCTG
TTCATCTTCA TCGATGAGGC ACAGCAGACC ATCAACTCCA ACAATGAGCA CGAGATCCAG
AAGCTCCGCG ACACGTTCAA GCACCTGGTG CAGATGGACG ATTGGCCGAT CCGCCTCATC
TTGGCGGGTG TTTCTCCCCT CGAGCGGCTG CGCGAGGACA TGCAGATCCG ATCCAGGTCC
ACGGTGCTGA ATGTCGGCGA TTTGGATCCG GTGGCGCACC GTGCCCATGT CGTCCACTGG
GTCACGAAGA TCGTCAACGA GCATGCCGAG CTTGCCCTAG CGGATTTCCT GAACGGCGAC
TTTCCGGAGA AGCTTGTCCA CGCCTGCGGA GGATGCTTCG GCTCCATCGT CGAGAGCACG
CGCCTGGCGG TGGAGCACGC GCTGATCGAG GGGGTTGATG AAGTCGGGGT CGCGCATTTC
GCAACCGCGT ACGCCCAGCG TACCGGGTGT TCGCCGAGCA ACAACATCTT CACCGCGAAG
GACTGGCGCT CGCTCGCGCC TGGCGCGGCG CGCAAGGAAG ACGCAAAGGC CGGATCTGCG
CCTGCGACTA ACCCGGCCTC AGGCCCGATG AAGCCGCTCC GCGGCGGGGA GCGCCGCAAG
TGA
 
Protein sequence
MTAKNLSPAL VEALSRVRQS MSADQTALAD RMATINARHL KTFRDDAFAA HVDRMKRGLV 
AHYSGDEKQY RMILVVGSSH SGKSTLVEHA LDNDPAFHSY VDSEGTETVP VLRFQAPSPC
TLRNLAVDGL EALGFPVKSD IVESRAWPLF RQQLKHRKVL FIFIDEAQQT INSNNEHEIQ
KLRDTFKHLV QMDDWPIRLI LAGVSPLERL REDMQIRSRS TVLNVGDLDP VAHRAHVVHW
VTKIVNEHAE LALADFLNGD FPEKLVHACG GCFGSIVEST RLAVEHALIE GVDEVGVAHF
ATAYAQRTGC SPSNNIFTAK DWRSLAPGAA RKEDAKAGSA PATNPASGPM KPLRGGERRK