| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1184 |
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| Symbol | gcvT |
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| ID | 5322031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1264127 |
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| End bp | 1265266 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640790126 |
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| Product | glycine cleavage system aminomethyltransferase T |
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| Protein accession | YP_001326870 |
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| Protein GI | 150396403 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.394661 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.161716 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGAAGACG TTTCCCCCCT GAAACACACG CCGCTGCACG CGCTGCATCT TTCGCGCGGG
GCGCGAATGG TGCCTTTCGC CGGCTATGAC ATGCCGGTTC AGTACCCGGA GGGCGTGCTG
AAGGAACACC TTCATACCCG TACCGCGGCC GGTGTTTTCG ACGTGTCCCA CATGGGTCAG
ATCCTCGTGC GGCCGAAGTC CGGAAAGATC GAGGACGCGG CACTGGCTCT GGAAAAGCTC
GTGCCGGTGG ACGTGCTCAG CCTCGCGGAA GGCCGGCAAC GCTATGGCCT GTTCACCAAT
GCGACAGGCG GCATTCTCGA CGACCTGATG ATCGTCAATC GCGGCGATCA TCTTTTCCTC
GTCGTTAATG CAGCCTGCAA GGACGCCGAT TTCGCGCATC TCAAGAATGG TCTTGGCAGT
CTCTGCGACG TGACCATGTT GACCGACCGC GCCCTGATTG CCCTTCAAGG CCCTCGGGCG
GGGGCGGTTC TCTGCGAACT GTGGGCAGAC GTCGCGTCGA TGCGCTTCAT GGATGTCGCC
GAAGCCGACC TTCACGACGT AAGCTGCATC ATATCCCGCT CCGGTTACAC CGGCGAGGAT
GGCTTCGAGA TTTCCATTCC CACCGAAGCG GCCGTTGATG TCACTCAACG TCTTCTCGAA
CACCCCGACG TCCTGCCGAT CGGCCTCGGC GCGCGCGACT CGCTCCGCCT CGAAGCGGGC
CTTTGTCTCT ACGGCAACGA TATCGACACG AGCACCAGCC CTATCGAAGC GGGACTCGAA
TGGGCAATCC AGAAAAGCCG CCGCGCCGAC GGTGAGCGCG CAGGCGGCTT TCCCGGCGCC
GACAGAATTC TGGCCGAGTT CACCCACGGG GTTTCCAGGC GGCGTGTCGG CTTGAAGCCC
GAGGGCCGTG CGCCCGTTCG AGGTGGCGTG CGGCTATTTG CCGATGCGGA AGGCAACACG
GCAGCAGGAA CGGTCACCTC CGGCGGTTTT GGCCCGAGTG TCGATGGACC GATTGCCATG
GGCTATGTCG ACGCCGAACA CGCGGAAACC GGTACCAGAC TGTTTGCGGA GGTGCGCGGC
AAGTTTCTGC CGGTCGCCGT CTCCGCCCTG CCCTTCATCA AACAAACGTA TAAACGCTGA
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| Protein sequence | MEDVSPLKHT PLHALHLSRG ARMVPFAGYD MPVQYPEGVL KEHLHTRTAA GVFDVSHMGQ
ILVRPKSGKI EDAALALEKL VPVDVLSLAE GRQRYGLFTN ATGGILDDLM IVNRGDHLFL
VVNAACKDAD FAHLKNGLGS LCDVTMLTDR ALIALQGPRA GAVLCELWAD VASMRFMDVA
EADLHDVSCI ISRSGYTGED GFEISIPTEA AVDVTQRLLE HPDVLPIGLG ARDSLRLEAG
LCLYGNDIDT STSPIEAGLE WAIQKSRRAD GERAGGFPGA DRILAEFTHG VSRRRVGLKP
EGRAPVRGGV RLFADAEGNT AAGTVTSGGF GPSVDGPIAM GYVDAEHAET GTRLFAEVRG
KFLPVAVSAL PFIKQTYKR
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