| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1181 |
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| Symbol | tig |
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| ID | 5322028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1259019 |
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| End bp | 1260494 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640790123 |
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| Product | trigger factor |
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| Protein accession | YP_001326867 |
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| Protein GI | 150396400 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
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| TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.176713 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0554389 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGTTA TCGAAACGCT CGCTCAAGGG CTGAAGCGCG AACTCAAGGT CGTCATTCCG
GCCGACGAAA TGGAAGCTCG GATGAACGAG CGTCTCGTCG AGGTGAAGGA TCGTGTTCGC
ATCAATGGCT TCCGCCCCGG CAAGGTGCCG GTTGCGCATC TGAAGAAGGT TTACGGCAAG
TCGATCATGG CCGATCTCGT CAACGAGATC GTTCGTGAAA AGCCGACGGA AATCCTCACC
AGCCGCGGCG AGAAGTCTGC GACCCAGCCG GAAATCGGGA TGACCGAGGA CGAGGCGGAA
GCTGACAAGA TCCTGAAGGC CGAAGCGGAT TTCGAATTCA CCGTCGCCTA CGAAATCATT
CCGCCGATCG AACTCAAGGA CGCGAGCGGC ATCAAGGTCA CTCGCGAAGT CGTTGATGTC
GGCGAAGACG AAGTCAACGA GCAGATCGAG CGCATCGCTG AAAGCGCCCG TACTTATGAA
TCGAAGAAGG GCAAGGCCGC CAATGGTGAC CGCGTCACGA TCGACTACCT GGGCAAGGTC
GACGGCGAAG CCTTTGACGG CGGCAAGGAC GAGGATGCGG AACTCGTGCT CGGCTCCAAC
CGCTTCATCC CCGGCTTCGA AGAGCAGCTC GTTGGCGCGA AGGCCGGCGA TGAAAAGACC
ATCACGGTCA CGTTCCCGGC CGACTACCCG GCAGCCAATC TCGCCGGCAA GGAAGCAACC
TTCGACGTCA CGGTGAAGGA CGTCGCTGCC GCGGCTCCGA TCGAGATCAA TGATGAGCTG
GCAACGAAGC TCGGCCTCGA ATCCGTCGAC AAGCTGAAGG AAATCGTTCG CGGCCAGATC
GAAAGCCAGT TCGGCTCGAT AACCCGCCAG AAGGTCAAGC GCCAGCTTCT AGACCAGCTC
GACGAACTCT ACCAGTTCGA TACGCCCGAG CGCCTCGTCG ACGCCGAATT CGAGAACATC
TGGCGCCAGA TCAACACCGA TCTGCAGCAG GCCGGCAAAA CCTTTGCCGA TGAAGACACG
ACGGAAGAGG AAGCCCGCGC CGAATACCGC AAGCTTGCCC AGCGTCGCGT CCGCCTTGGA
CTGGTTCTCT CCGAAATAGG CGAGAAGGCC GGTGTCCAGG TCAGCGATGA CGAGATGCAG
AATTCACTGT TCCAGCAGCT GCGTCAGTTC CCCGGCCAGG AAAAGGAAAT CATCGAATAT
TTCCGCAATA CGCCCGGCGC TGCCGCCTCT CTGCGCGCAC CGCTCTTCGA GGAGAAGGTC
GTCGACCATC TGCTCACCGA GGTCTCGGTG ACCGACAAGA AGGTGTCCAA GGAAGAGCTG
ACCGCGGAAG ACGACGCCGA CGAAAAACCG GCCAAGAAGA CGGCTTCCAA GAAGAAGGCA
GCTGCCAAGG CCGATGCCGC CGAGGGCGAA GAAGCCGCAG CGCCGAAAAG GAAGGCTCCG
GCCAAGAAAA AGGCTTCGGA CGAGAGCGCC GAGTAA
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| Protein sequence | MQVIETLAQG LKRELKVVIP ADEMEARMNE RLVEVKDRVR INGFRPGKVP VAHLKKVYGK
SIMADLVNEI VREKPTEILT SRGEKSATQP EIGMTEDEAE ADKILKAEAD FEFTVAYEII
PPIELKDASG IKVTREVVDV GEDEVNEQIE RIAESARTYE SKKGKAANGD RVTIDYLGKV
DGEAFDGGKD EDAELVLGSN RFIPGFEEQL VGAKAGDEKT ITVTFPADYP AANLAGKEAT
FDVTVKDVAA AAPIEINDEL ATKLGLESVD KLKEIVRGQI ESQFGSITRQ KVKRQLLDQL
DELYQFDTPE RLVDAEFENI WRQINTDLQQ AGKTFADEDT TEEEARAEYR KLAQRRVRLG
LVLSEIGEKA GVQVSDDEMQ NSLFQQLRQF PGQEKEIIEY FRNTPGAAAS LRAPLFEEKV
VDHLLTEVSV TDKKVSKEEL TAEDDADEKP AKKTASKKKA AAKADAAEGE EAAAPKRKAP
AKKKASDESA E
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