Gene Smed_1175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1175 
Symbol 
ID5322021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1253844 
End bp1254230 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content65% 
IMG OID640790116 
Producthypothetical protein 
Protein accessionYP_001326861 
Protein GI150396394 
COG category[S] Function unknown 
COG ID[COG3737] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0610341 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAG GGATCGAAAT GCGCGAAGCG CACTTTCCGG GACGGGCGCC TGTCGACGCT 
TACGGCAATG GCGGGTTCCG CTTCGCCGAC ATGTCGCATC GCGGCTCCGT TCTGATGCTG
CCTTCCGGTA TCTACGCCTG GGGCGTGGCC GAAGGCGATC TGCTTGCGGT CGCGAAGTTC
CAGCGTGTTT TCGATGAGGC GCCCGGAATC GAGGTGCTGC TCGTCGGAAC CGGCCTGGAA
ATCCGCCCGT TGCCGGTCGA GCTGAAAGCG GCGCTTAGGG CCGCCGGCAT CTCGTCCGAT
CCGATGAGCA CGGGTGCGGC GGTGCGAACC TACAACGTGA TGCTGGCGGA ATCGCGCGCC
GTCGCCGCGG CATTGATCGC GGTGTGA
 
Protein sequence
MAKGIEMREA HFPGRAPVDA YGNGGFRFAD MSHRGSVLML PSGIYAWGVA EGDLLAVAKF 
QRVFDEAPGI EVLLVGTGLE IRPLPVELKA ALRAAGISSD PMSTGAAVRT YNVMLAESRA
VAAALIAV