| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1172 |
|---|
| Symbol | |
|---|
| ID | 5322018 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 1249560 |
|---|
| End bp | 1250435 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640790113 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001326858 |
|---|
| Protein GI | 150396391 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2607] Predicted ATPase (AAA+ superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.818035 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.230421 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGAAA GCAAAATCGA CGTCCTGCTC GACGAAATAC ACAGGCTTTC GGCGGCGCTG
GAGCGTATCG CCGGACCGGC ATATGCCGTC AACGACTGGA ATGAGGCCGA CTGCTTCGTC
TGGGCTCCGG CGACGCGCCA TCTCCAGCCC GTACCGAAGC CGAACCGTAT CGATCTCGCA
CTCATTTCCG GCGTCGACCA CGTACGCGAC ATTCTCTTCG ACAATACCCT CCGCTTCGCC
CAAGGCTATC CCGCCAACAA CGTGCTCTTG TGGGGCGCGC GCGGCATGGG CAAATCATCC
CTGGTCAAGG CAGTCCATGC AAAGGTCGCA CATGACGCGG ACAGCGCGCT CAAACTCGTC
GAAGTGCACC GGGAGGACAT AGCCACTCTG CCCGTGCTCA TGGAAATCCT CAAGGCGGCG
CCTGTGCCGG TGATCGTATT CTGCGACGAT CTCTCATTCG ACCATGACGA TACGTCTTAC
AAGTCGCTGA AGGCAGTCCT CGACGGCGGC GTCGAAGGAC GTCCGGCAAA TGTCCTGCTC
TATGCGACAT CCAATCGCAG ACACCTGCTA CCCCGCAACA TGATGGAAAA CGAGCAATCC
ACCGCCATCA ACCCCTCGGA GGCCGTCGAA GAAAAGGTGT CGCTGTCCGA CCGCTTCGGT
CTTTGGCTGG GTTTCTACAA ATGCAGCCAG GACGATTATC TGGCGATGGT GGACGGATAT
GCCCAATACT TCAAATTGCC GGTCGAGCCC GAAACGCTGC ATGCCGAAGC TCTTGAATGG
GCGACGACAC GGGGATCGAG GTCCGGCCGC GTCGCCTGGC AATTCATCCA GGATCTGGCC
GGCCGCCTGC GCAGGCAGCT CGACACGCCG GCCTGA
|
|---|
| Protein sequence | MPESKIDVLL DEIHRLSAAL ERIAGPAYAV NDWNEADCFV WAPATRHLQP VPKPNRIDLA
LISGVDHVRD ILFDNTLRFA QGYPANNVLL WGARGMGKSS LVKAVHAKVA HDADSALKLV
EVHREDIATL PVLMEILKAA PVPVIVFCDD LSFDHDDTSY KSLKAVLDGG VEGRPANVLL
YATSNRRHLL PRNMMENEQS TAINPSEAVE EKVSLSDRFG LWLGFYKCSQ DDYLAMVDGY
AQYFKLPVEP ETLHAEALEW ATTRGSRSGR VAWQFIQDLA GRLRRQLDTP A
|
|---|
| |