| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1171 |
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| Symbol | |
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| ID | 5322017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1247627 |
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| End bp | 1249156 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640790112 |
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| Product | peptidase M23B |
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| Protein accession | YP_001326857 |
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| Protein GI | 150396390 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.816034 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.264871 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAAAT TTGAATCTCC CCAGGCAGGC AAGTCTATGA TCCGTCTCTG CGCGGCTATA
TTGCTTGCGG GTGTAGCGAC CGGTTGCAGT TCTGACGCCA GCCGCTTCGG CGGGCTCTTC
TCGCGGTCTG ACGACATAAT GACAGGCTCG ATCCCGCAGG GTTCGAGTAC GATGCCGAGA
GGCGATGTCG CAAGTGGCGA TGCAGCGCCC TCCTATGGAA ACAGCGCGTC GGTCGGTCAA
TCCTATCCCG CTGGCGGCGG CTACAATGCG GCAGCGGCGC CGGTCTCCAG TGCTCGTGTC
GCATCCACGC CTATGGCCGT CCAGCGTACG AGCCTCGACG AGCCGTCCGC CACATCCGGG
CAGCAGCAGG TTCGGACCGC TTCTCTCGAC TCGCAGGCCG CCGCCCTTCC GAGGTCGCAG
CCGCAGTCGG GGGGCGCCAG GGATATTCCG AGCAAGGGGG GGTGGAGTGC CTCCAACGCG
CCGACGATCT TGGTCCGTCA GGGCGACACG GTGACCGTTC TCGCCAGACG GTTCGGCGTC
CCCGAGAAGG AGATCCTGAG GGCGAACGGA TTGAAATCGT CAAGCCAGGT AGAGCCGGGC
CAGCGCCTGG TCATTCCGAC GTTTGGCGCC GCGGGCAGCG CCGCGAAGGC GGCTGCATCG
GGGTCGATCG CCGACGTGGA AGGTGGTAAG AGGCGCCCGT CGCCGCTGCC GACTGATCAG
CGCGAGGTCG CAATCCTCCC CGGTCAGTCC CAATCTCGCG AAAAGAACGA AAGCCGCAGC
GATGTGGCCG CAGGCAAGCT CAACAGCGCT GGCGAGGGCG GCGGCACTGG CGGTTATGCG
GTCAAGCCGG GCGACTCGCT GAACCGGATC GCCAAGGCGA ACGGTGTCTC GGTCGCTGCT
CTGAAGCAGG CAAACGGGCT TACGACGGAA GCCATCCGCA TCGGACAAAA ACTCAATATC
CCCAGCGCTT CGGCCAATAC GCCAGCGACC GACGCTGTCG TCACGGCTTC TGTCTCGCCC
AAGAAGAACG AAGCCAAGGT TGCCGCAACG GAGCAGTCCA AGCCGGCCGA AGCCAAGGCG
GCTGCCGCCA AGGAGAGCGT GTCCGAAGTC GCCATCAAGT CGGATGTCAA CGAAGATCTC
CCGAAGTCGA CCGGCATCGG GAAATACCGC TGGCCGGTCC GTGGCGCGGT CGTCGCTGCC
TATGGCGCCA ATGTCGATGG CAACCGGAAT GACGGTATCA ACATATCGGT TCCGGAGGGT
ACGCCTATCA AGGCGGCTGA GAACGGCGTC GTGATCTACT CGGGCAGCAG CCTCAAGGAG
CTCGGCAATG CCGTTCTGGT GCGCCACGAT GACGGTACCG TAACGGTCTA CGGCAATGCT
GCCGAACTGA AGGTGCAACG CGGTCAGAAG GTCCAGCGCG GGCAGACGCT CGCATCATCA
GGCATGACGG GCAGGGCATC GCGGCCGCAG GTGCACTTCG AGGTGCGCAA GAATGCGACC
CCGGTCAACC CGGTGACCTA TCTCGAATAG
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| Protein sequence | MRKFESPQAG KSMIRLCAAI LLAGVATGCS SDASRFGGLF SRSDDIMTGS IPQGSSTMPR
GDVASGDAAP SYGNSASVGQ SYPAGGGYNA AAAPVSSARV ASTPMAVQRT SLDEPSATSG
QQQVRTASLD SQAAALPRSQ PQSGGARDIP SKGGWSASNA PTILVRQGDT VTVLARRFGV
PEKEILRANG LKSSSQVEPG QRLVIPTFGA AGSAAKAAAS GSIADVEGGK RRPSPLPTDQ
REVAILPGQS QSREKNESRS DVAAGKLNSA GEGGGTGGYA VKPGDSLNRI AKANGVSVAA
LKQANGLTTE AIRIGQKLNI PSASANTPAT DAVVTASVSP KKNEAKVAAT EQSKPAEAKA
AAAKESVSEV AIKSDVNEDL PKSTGIGKYR WPVRGAVVAA YGANVDGNRN DGINISVPEG
TPIKAAENGV VIYSGSSLKE LGNAVLVRHD DGTVTVYGNA AELKVQRGQK VQRGQTLASS
GMTGRASRPQ VHFEVRKNAT PVNPVTYLE
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