| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1168 |
|---|
| Symbol | surE |
|---|
| ID | 5322014 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 1245158 |
|---|
| End bp | 1245928 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640790109 |
|---|
| Product | stationary phase survival protein SurE |
|---|
| Protein accession | YP_001326854 |
|---|
| Protein GI | 150396387 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0496] Predicted acid phosphatase |
|---|
| TIGRFAM ID | [TIGR00087] 5'/3'-nucleotidase SurE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.318456 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0991312 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATCC TGCTGACGAA CGACGATGGC ATTCACGCGG AAGGTCTTTC CGTGCTCGAA
CGGATCGCTC GAACGATAAC CGACGATGTT TGGGTCGTCG CGCCGGAAGT GGACCAGAGC
GGGCTTGCCC ATTCGCTGAC GCTTTCGGAG CCCTTGCGCC TGCGCCCGGT TTCAGAACGG
CGGTTTGCGC TCCGGGGCAC ACCGACGGAT TGCGTGATCA TGGCGGTGAA GAAGATCCTC
GACCGAAAGC CCGATCTCGT TCTTTCCGGC GTCAATATCG GCGCCAACCT TGCAGACGAC
GTAACCTATT CCGGAACCGT GGCGGGCGCG ATCGAAGGCA CGTTGCAGGG GATTCGCTCG
ATGGCCCTCA GCCAGGCATA TCACTACGCC GTCGGCCGGG AGGTTCCCTG GGATGTGGCG
GAGACGCACG CGCCGGCTCT CATCCGCACA TTGATGGATG TCGACCTGCC GGATGGAACG
CTTGTCAATT TGAACTTCCC GAATTGCGCC GTCGATTCCG TTGCGGGAGT TGAGGTCACA
TCGCAAGGCA AGCTCGATTT CGGTCTCAGC ATCGACGAGC GGACGGATGG ACGCGGCTTT
CCCTATTTCT GGCTGCGTTT CGGCGAGCGT GCCGGCGATT TCCGTTCCGG CACCGACATT
CGGGCGTTGC GGGATAACAA GATATCGGTA ACCCCGCTTA AACTAGATAT GACCGATCAT
GCCGTTCAGG ATCTTATAGC GCGCGCATTG CGGAAAGGGA CGGTCGCTTG A
|
|---|
| Protein sequence | MRILLTNDDG IHAEGLSVLE RIARTITDDV WVVAPEVDQS GLAHSLTLSE PLRLRPVSER
RFALRGTPTD CVIMAVKKIL DRKPDLVLSG VNIGANLADD VTYSGTVAGA IEGTLQGIRS
MALSQAYHYA VGREVPWDVA ETHAPALIRT LMDVDLPDGT LVNLNFPNCA VDSVAGVEVT
SQGKLDFGLS IDERTDGRGF PYFWLRFGER AGDFRSGTDI RALRDNKISV TPLKLDMTDH
AVQDLIARAL RKGTVA
|
|---|
| |