| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1139 |
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| Symbol | lpxD |
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| ID | 5321985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1208600 |
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| End bp | 1209664 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640790080 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| Protein accession | YP_001326825 |
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| Protein GI | 150396358 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0838333 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAGA ATTGGTTTTT CCCGCCCCAT GACGGGATTC GTTTGGGCGA CCTTGCGGAT
CAGATTGGGG CGGAATTGCT GGATGCTACC GCCGCCGACC GCGCAGTGCG TGCGGTCGCG
CCGGTCTATC GCGCCAAGGC CGGCGACGTC TGTTACATGC TGTCGCGCAA AAGCCGCGAG
GAATTGCAGA CCTGCAGCGC CACTGCGATC ATCTGCGACA AGGCGATATC GTCGCTCGTT
CCCGATACCA TTCCCGTATT ATTGACCGCG AAGCCGCATA CCGCCTTTGC GCTTGCAGGC
ACCTTGCTTC ATGAAAGGGC CATGCGGCCA TCCTATAATA CGAGTGAGAG AGGCGTATCT
CCGGGAGCCT TCGTCGATTC CACGGCGCGC CTGGAGGCAG GCGTAGAGGT CGAGCCGATG
GCGGTGATCG GTGCCGGCGC TGAAATCGGA AGCGGCACGC GAATCGCTGC GGGCGCCATG
ATAGGACCCG GTGTGCGGAT CGGCCGCGAT TGCACCATCT CCGCGGGTGT GAGCATTCTT
TGCGCGCTGA TCGGCAACAA CGTCATCATT CACCCTGGAA CGCGCATCGG CCAGGACGGG
TTCGGCTATG CGCCTGGTCC GACGGGCGGG ATGATCAAAA TCGTCCAGGT CGGACGGGTG
ATCATACAGG ATCACGTTGA GATCGGTGCC AACACGACGA TCGATCGTGG CACCATGGAC
GACACGGTGA TCGGCGAGGG GACGAAGATC GACAATCTCG TGCAGATCGG CCACAACGTG
CGCATTGGCC GCTATTGCGG CATCGTCAGT CAGGTCGGCA TTGCCGGCAG CGCCCAGATC
GGCGACGGAG TGATGATCGG CGGAGGCGTC GGGGTCAACG GGCATACCAG CATCGGAAGT
GGTGCGCAGA TCGCAGCAAT GAGTGGCGTG GCAAGCGATG TGCCGGCCGG CGAACGCTAC
GGCGGTATTC CGGCGCGGCC GATGCGCGAC TTTCTCCGCG ATGTCGCTGA AATGGCGCTG
AGGTCGAGCG AGAGGCAGAA GAAGAAGGGT GGCAAGGATG AATGA
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| Protein sequence | MEKNWFFPPH DGIRLGDLAD QIGAELLDAT AADRAVRAVA PVYRAKAGDV CYMLSRKSRE
ELQTCSATAI ICDKAISSLV PDTIPVLLTA KPHTAFALAG TLLHERAMRP SYNTSERGVS
PGAFVDSTAR LEAGVEVEPM AVIGAGAEIG SGTRIAAGAM IGPGVRIGRD CTISAGVSIL
CALIGNNVII HPGTRIGQDG FGYAPGPTGG MIKIVQVGRV IIQDHVEIGA NTTIDRGTMD
DTVIGEGTKI DNLVQIGHNV RIGRYCGIVS QVGIAGSAQI GDGVMIGGGV GVNGHTSIGS
GAQIAAMSGV ASDVPAGERY GGIPARPMRD FLRDVAEMAL RSSERQKKKG GKDE
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