Gene Smed_1136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1136 
Symbol 
ID5321982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1203886 
End bp1204719 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content61% 
IMG OID640790077 
Productphosphatidate cytidylyltransferase 
Protein accessionYP_001326822 
Protein GI150396355 
COG category[I] Lipid transport and metabolism 
COG ID[COG0575] CDP-diglyceride synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGCGG AACTCAAACT TCGCATCGCT TCAGGCGTAG TTCTCGCTGC GGCGGTTCTT 
GCTGCGACCT GGGTCGGCGA CTTCGCATTC CAACTCCTCT CCGTCGCGAT CGGTCTCCTC
GTCTACTATG AGTGGTCCAC CATCACAAAG CTGCCGGAGC AGGATTTTCA GGGCAATGCC
CTTGGCTGGC TGGCGCAGGT GGTGATCGCG GGGCTCGTTC TTTTCGATTA TATGCATGTC
AGCCTTCCTG GCCTTGCCAT ATGCGTGCTC GCGACATCGC TTTGGGTACT GACAAAGGGC
ACCAGCTGGT GGCTGCCGGG AGGGATCGTC TATGCGGGCC TGACGAGCAT TTCGCTCGCG
GCGATCCGTG GGGCGGATTA TCTCGGGCTG ACGGCGATGC TGTTCGTGTT CGCCGTCGTA
TGGGCCACGG ATATTTTCGC CTACTTCACC GGACGCGCGA TCGGCGGACC CAAGCTGGCT
CCGGCTATCT CCCCGGGCAA GACCTGGTCG GGCGCAATCG GCGGGGCGAT TTTCGGCGTT
TTTGCGGGTG TTGCCGTTTT CATGGCTCAT TTTTCACTCG AGGATTTGCG CATTCCGGTC
ATCGCGCTGG TCCTGTCCGT CGCAAGTCAG ACAGGTGACC TTTTCGAGTC CTTCGTCAAG
CGCCGCTTCG GCGTCAAGGA CTCGAGCAGG CTGATCCCGG GCCATGGTGG TGTCATGGAC
CGGGTCGACG GATTGATATT CGCCTGCATT GCCGCGCTGG GTCTGGTACT TGGACAACTT
CTGGTGGCGG GCGGCCGCGA GGTCGGATTC GGCTCGGTTC TGCTGGGTCT TTGA
 
Protein sequence
MQAELKLRIA SGVVLAAAVL AATWVGDFAF QLLSVAIGLL VYYEWSTITK LPEQDFQGNA 
LGWLAQVVIA GLVLFDYMHV SLPGLAICVL ATSLWVLTKG TSWWLPGGIV YAGLTSISLA
AIRGADYLGL TAMLFVFAVV WATDIFAYFT GRAIGGPKLA PAISPGKTWS GAIGGAIFGV
FAGVAVFMAH FSLEDLRIPV IALVLSVASQ TGDLFESFVK RRFGVKDSSR LIPGHGGVMD
RVDGLIFACI AALGLVLGQL LVAGGREVGF GSVLLGL