Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1136 |
Symbol | |
ID | 5321982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 1203886 |
End bp | 1204719 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640790077 |
Product | phosphatidate cytidylyltransferase |
Protein accession | YP_001326822 |
Protein GI | 150396355 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0575] CDP-diglyceride synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGCGG AACTCAAACT TCGCATCGCT TCAGGCGTAG TTCTCGCTGC GGCGGTTCTT GCTGCGACCT GGGTCGGCGA CTTCGCATTC CAACTCCTCT CCGTCGCGAT CGGTCTCCTC GTCTACTATG AGTGGTCCAC CATCACAAAG CTGCCGGAGC AGGATTTTCA GGGCAATGCC CTTGGCTGGC TGGCGCAGGT GGTGATCGCG GGGCTCGTTC TTTTCGATTA TATGCATGTC AGCCTTCCTG GCCTTGCCAT ATGCGTGCTC GCGACATCGC TTTGGGTACT GACAAAGGGC ACCAGCTGGT GGCTGCCGGG AGGGATCGTC TATGCGGGCC TGACGAGCAT TTCGCTCGCG GCGATCCGTG GGGCGGATTA TCTCGGGCTG ACGGCGATGC TGTTCGTGTT CGCCGTCGTA TGGGCCACGG ATATTTTCGC CTACTTCACC GGACGCGCGA TCGGCGGACC CAAGCTGGCT CCGGCTATCT CCCCGGGCAA GACCTGGTCG GGCGCAATCG GCGGGGCGAT TTTCGGCGTT TTTGCGGGTG TTGCCGTTTT CATGGCTCAT TTTTCACTCG AGGATTTGCG CATTCCGGTC ATCGCGCTGG TCCTGTCCGT CGCAAGTCAG ACAGGTGACC TTTTCGAGTC CTTCGTCAAG CGCCGCTTCG GCGTCAAGGA CTCGAGCAGG CTGATCCCGG GCCATGGTGG TGTCATGGAC CGGGTCGACG GATTGATATT CGCCTGCATT GCCGCGCTGG GTCTGGTACT TGGACAACTT CTGGTGGCGG GCGGCCGCGA GGTCGGATTC GGCTCGGTTC TGCTGGGTCT TTGA
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Protein sequence | MQAELKLRIA SGVVLAAAVL AATWVGDFAF QLLSVAIGLL VYYEWSTITK LPEQDFQGNA LGWLAQVVIA GLVLFDYMHV SLPGLAICVL ATSLWVLTKG TSWWLPGGIV YAGLTSISLA AIRGADYLGL TAMLFVFAVV WATDIFAYFT GRAIGGPKLA PAISPGKTWS GAIGGAIFGV FAGVAVFMAH FSLEDLRIPV IALVLSVASQ TGDLFESFVK RRFGVKDSSR LIPGHGGVMD RVDGLIFACI AALGLVLGQL LVAGGREVGF GSVLLGL
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