Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1135 |
Symbol | |
ID | 5321981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 1203128 |
End bp | 1203886 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640790076 |
Product | undecaprenyl pyrophosphate synthase |
Protein accession | YP_001326821 |
Protein GI | 150396354 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCCGGAC AGCCCATGCA AGAATTCAAT CCCGCAAACG TGCCGGCGCA CGTCGCCATC ATCATGGACG GCAACGGTCG CTGGGCGAAT GCGCGCGGAC TGCCGCGCAC CATGGGGCAC CGCAAGGGCG TCGAGGCGGT CCGTGGCGCG GTGAAGACGG CTGCTGAGTT AGGCATCCGA TATCTGACGC TGTTCGCTTT CTCGTCGGAG AACTGGAACA GGCCCGAAAA CGAAGTCAGC GATCTCATGG GCCTGCTCAA GGCTTTCATC CGCCGGGACC TCGCCGATCT CCACCGTGAG AATGTCCGCA TACGGGTCAT CGGAGACCGC TCGAATCTGA GCGGAGATAT CCTGCCGCTG CTCATCGAAG CGGAGGAGAC GACGATCGCC AATAGCGGCA TCACGGTCAT CATTGCATTC AATTACGGCG CCAGGGACGA GCTGGCGAGG GCCATGCGCC ATCTGGCGGA ACACGTCGCC GCCGGTCGTC TCCGGCCGGA TGAGATCACC CCCGAAAGAA TCTCGGCAAC GATCGACACG GCGGGGGTTC CGGATCCCGA TCTCATAATC CGGACGAGCG GCGAGGAGCG CCTCTCCAAC TTTCTCCTGT GGCAGGGCGC CTACTCCGAA TTGCTGTTCA TTCCGGAACT CTGGCCGGAT TTCACGCGCG AGACGTTTCT CGCGGCGATC GAACAATATG CCTGCCGAGA GCGCCGTTTC GGTGGTTTGG CGCAACCGAC TCTGGCGGTC GGCTCCTGA
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Protein sequence | MSGQPMQEFN PANVPAHVAI IMDGNGRWAN ARGLPRTMGH RKGVEAVRGA VKTAAELGIR YLTLFAFSSE NWNRPENEVS DLMGLLKAFI RRDLADLHRE NVRIRVIGDR SNLSGDILPL LIEAEETTIA NSGITVIIAF NYGARDELAR AMRHLAEHVA AGRLRPDEIT PERISATIDT AGVPDPDLII RTSGEERLSN FLLWQGAYSE LLFIPELWPD FTRETFLAAI EQYACRERRF GGLAQPTLAV GS
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