| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1129 |
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| Symbol | |
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| ID | 5321975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1196783 |
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| End bp | 1197784 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640790070 |
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| Product | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein |
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| Protein accession | YP_001326815 |
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| Protein GI | 150396348 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGAGGA ATACCGTGAC TTTTACCCGA CGCAGTTTTC TTGGTGCTGC CGCTGCCGGA
GCGCTCGCAA CCCCGATGCT GGGTGTCGCC ACGCGACGCG GTTACGCTCA GGTCAAGCCC
GTAAGAATAG GTTACATCGC CGACTATTTC GGCACGAGCC TAACGGCCAT CGCCACCGAC
CAGAACTTGT GGGCCAAACA TGGCCTCGAG CCCGACTTGA AGGTGTTCAC CAACGGCCCG
ATCCAGATCC AGGCGTTGGG CGCGGGCAGC CTCGATTTCG GCTATGTCGG TCCCGGTGCC
CTTTGGCTTC CGGCCATGGG CAAGGCCAAA CTCGTCGCGA TCAATGCGCT CGGCCTGTCC
GACCGTGTGA TTGCGCAGAA AGGCATCAAC TCGGTGGCGG ATCTGAAGGG GAAAAAGGTC
GGCGTTCCGG AGGGCACGTC AGGTGACATG CTTTTGCGTC TAGGGCTCGC CAAGGCCGGC
ATGTCGATTT CCGACATAGA AGTGGTCAAA ATGGACCCAT CGACCGTTGT TGCGGCCTTT
GCGTCGAAGC AGATCGATGG CGCCGGCATC TGGTATCCCC TGGTTGGCAT TATCAGAAAG
ACCGTCCCGG ATCTGGTTGA AGTCGCCAAG AGCGACGAAT TCTATCCGGA AAATTCGTTC
CCGTCGGCCT TCGTCGCCCG AAATGAGGTG ATCACCGACG ACATCGACAT GGCCGGAAAG
TTCGTCGCCA CGATGAAGGA GGCCAACGAC TATCGCGCTG CCGACGTGCC GCGCTCGGTC
GAAATCACCG CCAAATTCCT CGGCGTGCCG ATAGAACCGC TTCAAGTCGA AAGCGAGAAC
GGCAAGTTTT TGACTTCGGA GGAGCTTGCC GCCGCCAGCA AGGATGGCAC GGTGGCCGGC
TGGCTGAAGG GACTCAATGA CCAGTTCGTT GCTTTCGGCA AGATGCAGGA CCCGCTCGAC
CCGGAGGATT ATTATCTCGC CGACCTTTAC GCGGGCAATT AG
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| Protein sequence | MRRNTVTFTR RSFLGAAAAG ALATPMLGVA TRRGYAQVKP VRIGYIADYF GTSLTAIATD
QNLWAKHGLE PDLKVFTNGP IQIQALGAGS LDFGYVGPGA LWLPAMGKAK LVAINALGLS
DRVIAQKGIN SVADLKGKKV GVPEGTSGDM LLRLGLAKAG MSISDIEVVK MDPSTVVAAF
ASKQIDGAGI WYPLVGIIRK TVPDLVEVAK SDEFYPENSF PSAFVARNEV ITDDIDMAGK
FVATMKEAND YRAADVPRSV EITAKFLGVP IEPLQVESEN GKFLTSEELA AASKDGTVAG
WLKGLNDQFV AFGKMQDPLD PEDYYLADLY AGN
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