| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1120 |
|---|
| Symbol | |
|---|
| ID | 5321966 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 1189637 |
|---|
| End bp | 1190056 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640790061 |
|---|
| Product | histidine triad (HIT) protein |
|---|
| Protein accession | YP_001326806 |
|---|
| Protein GI | 150396339 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.636565 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCT ATGACACCAA CAACATCTTC GCCAAGATAC TGCGCGGCGA AATTCCCTCG
CATCGCGTCT ATGAGGATGA GGCCACGGTT GCGTTCATGG ATGTGATGCC GCAGGCCGAA
GGCCACGTTC TGGTGCTGCC GAAGGCACCG TCACGCAACA TCCTCGATGT CGAGCCGGCT
ATCCTCGCCA GCCTGATCGT CACCGTCCGG AAGATTGCCG TTGCCGCCAA GGCCGCCTTC
GATGCGGACG GCATCACGAT CATGCAATTC AACGAGGCAC CGGCCGGACA ATCCGTCTTC
CATCTGCATT TCCACGTGAT CCCCAGGCGG GAGGGCATTG CGCTGAGGCC GCATTCCGGC
AAGATGGAAG ATGGCGACAT TCTCGCTGCC AATGCCGAGA AGATACGCCG GCACCTCTGA
|
|---|
| Protein sequence | MSAYDTNNIF AKILRGEIPS HRVYEDEATV AFMDVMPQAE GHVLVLPKAP SRNILDVEPA
ILASLIVTVR KIAVAAKAAF DADGITIMQF NEAPAGQSVF HLHFHVIPRR EGIALRPHSG
KMEDGDILAA NAEKIRRHL
|
|---|
| |