Gene Smed_1115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1115 
Symbol 
ID5321961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1184905 
End bp1185258 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content55% 
IMG OID640790056 
Productphasin family protein 
Protein accessionYP_001326801 
Protein GI150396334 
COG category[S] Function unknown 
COG ID[COG5490] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01841] phasin family protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.76802 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAACT TCGACGATGC GAACAAAAAG AGCAAGGAAG CCCTCGACGT GGCCGTGAAG 
AGCTATTCCG CCATGACCAA AGGCTTTCAG GCTATTGCGA CCGAGGCGGC CGACTATTCG
AAGAAATCCT TCGAGGACGG CGTTGCTCAT CTCGAAAGGC TTACCAGTGC CAGAAGCCTT
GAAGCAGCAT TTGAACTTCA GACGAATTTC CTGAAGACAA GCTACGAAGG TTTCTTCACC
GAAGCGACGA AGATCGGTGA GATGTATGCC GACCTGGCCA AGGACGCCTA CAAGCCTTAT
GAGGCCCCGG TTGCCAAGGC GACCGCTGCG GTCAAGACGG CGGCCGCCGC CTGA
 
Protein sequence
MFNFDDANKK SKEALDVAVK SYSAMTKGFQ AIATEAADYS KKSFEDGVAH LERLTSARSL 
EAAFELQTNF LKTSYEGFFT EATKIGEMYA DLAKDAYKPY EAPVAKATAA VKTAAAA