Gene Smed_1113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1113 
Symbol 
ID5321959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1183473 
End bp1184300 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content62% 
IMG OID640790054 
Productserine O-acetyltransferase 
Protein accessionYP_001326799 
Protein GI150396332 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1045] Serine acetyltransferase 
TIGRFAM ID[TIGR01172] serine O-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.860963 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGCCA AAACAGAACT TCGTCACACG GAATCGCTCG ACGCGATCGA CCCGATCTGG 
GACAGCCTGC GTGAAGAGGC GCGTCTTGCC GCCGAGCGCG ACCCGATGCT TGCCGCCTTT
CTTTATTCCA CGGTGGTCAA TCAGCATTCC CTGGAAGACT GTGTTATCTA CCGGATCTGC
GAGAGGCTGG ACCATCCCGA TCTCCAGGCA AGCCTCCTGC ATCAAACCTT TGCCGAAATG
CTGGACGACT GGCCCGAATG GGGCGCCATC CTGCGCGTCG ATATCCAGGC GGTCTACGAT
CGCGATCCCG CCTGCACGCG CTTCGTGGAG CCCGTGCTCT ATTTCAAGGG CTTCCATGCC
ATACAGACGC ACCGTCTGGC GCACTGGCTG TGGAATCGTG GTCGGCGAGA CTTTGCGCTC
TATCTCCAGA GCCGCTCCTC CAGCGTCTTC CAGACCGACA TCAATCCGGC CGCCCGCATT
GGGCGCGGCA TCTTCCTCGA CCATGCGACG GGCCTCGTCG TCGGCGAGAC CGCAATCATC
GGCGACAATG TTTCGATCTT GCACGGCGTG ACGCTTGGCG GCACCGGCAA GGAAGGCAGC
GACCGCCATC CGAAGATCGG CAACGGCGTG CTGATCGGTG CCGGAGCCAA GATTCTCGGC
AATATCCATA TCGGCCATTG CTCGCGCGTG GCTGCCGGCT CAGTCGTGCT GAAAGCCGTT
CCTCCGAAAT CAACGGTTGC CGGGGTGCCG GCGAAGGTCG TCGGCGAGGC TGGCTGTTCC
GAGCCGTCGC GTCAGATGGA CCAGATCCTG GCGTCGTTCG ATATCTGA
 
Protein sequence
MVAKTELRHT ESLDAIDPIW DSLREEARLA AERDPMLAAF LYSTVVNQHS LEDCVIYRIC 
ERLDHPDLQA SLLHQTFAEM LDDWPEWGAI LRVDIQAVYD RDPACTRFVE PVLYFKGFHA
IQTHRLAHWL WNRGRRDFAL YLQSRSSSVF QTDINPAARI GRGIFLDHAT GLVVGETAII
GDNVSILHGV TLGGTGKEGS DRHPKIGNGV LIGAGAKILG NIHIGHCSRV AAGSVVLKAV
PPKSTVAGVP AKVVGEAGCS EPSRQMDQIL ASFDI