Gene Smed_1111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1111 
Symbol 
ID5321957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1182076 
End bp1182321 
Gene Length246 bp 
Protein Length81 aa 
Translation table11 
GC content57% 
IMG OID640790052 
Producthypothetical protein 
Protein accessionYP_001326797 
Protein GI150396330 
COG category[S] Function unknown 
COG ID[COG4391] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.577927 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGCC ACAGCATCCC CCATTTCCAG AACGACGGCG GGCACCGGGT CATTGAGATC 
GGCGTCAAGG AATTCATGTG CACGGGCGCT TCCGTCCCGT TCGATCATCC TCACATCTTC
GTCGACATGG GCGACGAAAA CGAGAAGGTC TGTTCCTACT GCTCGACGCT CTACCGTTAC
AATCCCTCTC TAAAGGCAAC GGAAACCATC CCGCCGGGTT GCCTTTTCTC CACCAAAGCC
GCTTGA
 
Protein sequence
MAGHSIPHFQ NDGGHRVIEI GVKEFMCTGA SVPFDHPHIF VDMGDENEKV CSYCSTLYRY 
NPSLKATETI PPGCLFSTKA A