| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1089 |
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| Symbol | |
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| ID | 5321935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1156651 |
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| End bp | 1157793 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640790030 |
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| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
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| Protein accession | YP_001326775 |
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| Protein GI | 150396308 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGAGA AGGCACCGGC TGACGGCGCA AACGATCTTT CCATGGCCGT GCTGAACGCG
ATTCAGAATC CGGTCATCCT GGTGGATGAG AACGGCTTTG TCGCCTTTGC GAACTGGGAG
GCGGAATCCT TCTTCGGTGC CAGCGCCAAC CATCTTGCGC GGCATGACAT CAGCGCGTTC
ATTCCCTTCG GCAGCCCGCT CCTGACGCTG ATCGATCAGG TTCGCGAGCG GCGCGCTGCG
GTGAACGAGT ACCGGGTAGA CCTCAGCTCT CCGCGCCTCG GGGCCGACAA GCTCGTCGAT
CTCTACGTGG CCCCGGTACT CTCGCAACCC GGATCGGTGG TGGTCGTCTT TCAAGAGCGG
TCGATGGCGG ACAAGATCGA TCGCCAGCTG ACACATCGGA CGGCGGCGCG ATCCGTCACG
GGGCTTGCTT CGATGCTGGC GCACGAAATC AAAAACCCTC TTTCCGGCAT TCGCGGCGCC
GCGCAGCTCC TCGAAACCTC CGTCAACGAC GAAGACAGGG CGCTCACAAG ATTGATCTGT
GACGAGACCG ACCGCATCGT CTCGCTCGTG GACCGGATGG AGGTCTTCTC CGACGAGCGT
CCCGTCGACC GCGTGCCCCT TAACATTCAT GCGATACTCG ACCACGTCAA GGCAATCGCG
AAGGCCGGCT TTGCCCGGCG GATCAAGATC TCCGAACATT ATGACCCGTC GCTTCCGCCC
GTTTTCGCAA ATCGCGACCA GCTGGTTCAG GTGTTCCTCA ATCTGGTAAA GAATGCGGCC
GAGGCGATCG GCGACAGGGC GGACGGCGAA ATTCTGCTGA CGACGGCCTA TAGGCCGGGC
ATTCGCCTCT CGGTCGCCGG TACGCGCGAA AAAATCTCGC TCCCGCTGGA ATTCTGCGTG
CATGACAACG GGCCGGGTGT ACCCGCCGAT CTTCTGCCGC ATCTTTTCGA CCCTTTCATC
ACCACCAAGA CGAACGGGTC CGGCCTCGGT CTCGCGCTTG TGGCGAAGAT CATCGGCGGC
CATGGCGGCA TCGTCGAATG CGACAGCCAG CATAGCCGCA CGATATTCCG CGTTCTGATG
CCGGCGTCCA AGGGCCCAGC GGCAGATGAC GAAACTCCGA TGACAAAAGG AACCAATGGA
TGA
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| Protein sequence | MTEKAPADGA NDLSMAVLNA IQNPVILVDE NGFVAFANWE AESFFGASAN HLARHDISAF
IPFGSPLLTL IDQVRERRAA VNEYRVDLSS PRLGADKLVD LYVAPVLSQP GSVVVVFQER
SMADKIDRQL THRTAARSVT GLASMLAHEI KNPLSGIRGA AQLLETSVND EDRALTRLIC
DETDRIVSLV DRMEVFSDER PVDRVPLNIH AILDHVKAIA KAGFARRIKI SEHYDPSLPP
VFANRDQLVQ VFLNLVKNAA EAIGDRADGE ILLTTAYRPG IRLSVAGTRE KISLPLEFCV
HDNGPGVPAD LLPHLFDPFI TTKTNGSGLG LALVAKIIGG HGGIVECDSQ HSRTIFRVLM
PASKGPAADD ETPMTKGTNG
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