| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1081 |
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| Symbol | |
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| ID | 5321927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1149634 |
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| End bp | 1151079 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640790023 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_001326768 |
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| Protein GI | 150396301 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.378558 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGAGA ATTACGACGT GATCGTTGTC GGTTCGGGTC CGGGCGGCTA CGTTACCGCC
ATCCGCTCGG CACAACTTGG CTTGAAGACG GCGATCGTCG AGCGCGAACA TCTCGGCGGC
ATCTGCCTCA ATTGGGGCTG CATTCCGACC AAGGCGCTTC TACGTTCCGC CGAAATCCTC
GACCATGCCA ATCATGCCAA GAACTACGGC CTGACGCTCG AAGGCAAGAT CACCGCCAAC
GTCAAGGATG TCGTCGCCCG GTCGCGGGCG GTCTCGGCAC GCTTGAACGG CGGCGTCGCC
TTCCTGATGA AGAAGAACAA GGTCGACGTG ATCTGGGGCG AGGCGAAGCT GACGAAGCCC
GGCGAAATCG TCGTAGGCAG CCCGTCCAGG CCGGCTGTCC AGCCGCAGAA TCCGGTACCG
AAGGGCGTCA AGGGCGAGGG CACCTATACC GCTAAACACA TCATCCTCGC CACCGGCGCC
CGCCCGCGGG CACTTCCCGG CATCGAGCCG GATGGGAAGC TGATCTGGAC CTATTTCGAG
GCGATGAAGC CGGCGGAATT TCCGAAATCG CTGCTCGTGA TGGGCTCCGG TGCGATCGGG
ATCGAATTCG CGAGCTTCTA CCGCTCGATG GGCGTCGACG TGACAGTGAT CGAACTGCTG
CCGCAGATCA TGCCGGTCGA GGATGCGGAG ATCTCAGCCT TCGCTCGCAA GCAGCTCGAA
AAACGCGGCC TGAAGATCAT CACCGACGCC AAGGTGACAA AGGTCGAGAA GGGCGCCAAC
GACGTTACCG CGCATGTCGA GACGAAGGAC GGTAAGGTTA CGCCGATGAA GGCCGAGCGC
CTGATCTCCG CGGTAGGGGT GCAGGGCAAC ATCGAGAACC TCGGCCTCGA GGCTCTTGGC
ATCAAGACCG ACCGGGGCTG CATCGTTACC GATGGCTACG GCAAAACCAA TGTGCCCGGC
ATCTATGCGA TCGGCGACGT TGCCGGCCCG CCGATGCTGG CGCACAAGGC AGAACACGAG
GGCGTGATCT GCGTCGAGAA GATTGCAGGG GTCCCCGGCG TGCACGCACT CGACAAGGGC
AAGATTCCGG GCTGCACCTA TTGCGACCCC CAGGTCGCCT CCGTCGGCCT CACGGAGGCC
AGGGCCAAGG AACTCGGCCG CGACGTTCGC GTCGGCCGCT ACAGCTTCAA CGCGAACGGC
AAAGCGATCG CGCTCGGCGA GGACCAGGGC CTGATCAAGA CGATCTTCGA CAAGATGACC
GGAGAATTGC TCGGCGCCCA TATGGTGGGC GCCGAAGTCA CCGAACTCAT TCAGGGCTTC
GTCGTCGCCA TGAACCTGGA GACGACGGAA GAGGAGCTGA TGCACACGGT GTTCCCGCAC
CCGACGCTTT CGGAGATGAT GAAGGAAAGC GTGCTCGACG CCTACGGTCG GGTATTGAAC
GCCTGA
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| Protein sequence | MAENYDVIVV GSGPGGYVTA IRSAQLGLKT AIVEREHLGG ICLNWGCIPT KALLRSAEIL
DHANHAKNYG LTLEGKITAN VKDVVARSRA VSARLNGGVA FLMKKNKVDV IWGEAKLTKP
GEIVVGSPSR PAVQPQNPVP KGVKGEGTYT AKHIILATGA RPRALPGIEP DGKLIWTYFE
AMKPAEFPKS LLVMGSGAIG IEFASFYRSM GVDVTVIELL PQIMPVEDAE ISAFARKQLE
KRGLKIITDA KVTKVEKGAN DVTAHVETKD GKVTPMKAER LISAVGVQGN IENLGLEALG
IKTDRGCIVT DGYGKTNVPG IYAIGDVAGP PMLAHKAEHE GVICVEKIAG VPGVHALDKG
KIPGCTYCDP QVASVGLTEA RAKELGRDVR VGRYSFNANG KAIALGEDQG LIKTIFDKMT
GELLGAHMVG AEVTELIQGF VVAMNLETTE EELMHTVFPH PTLSEMMKES VLDAYGRVLN
A
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