| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1078 |
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| Symbol | |
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| ID | 5321924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1146958 |
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| End bp | 1148331 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640790020 |
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| Product | pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase |
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| Protein accession | YP_001326765 |
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| Protein GI | 150396298 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01349] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0468919 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAATCA ACATCACCAT GCCGGCCCTC TCTCCGACGA TGGAAGAAGG CAATCTCGCC
AAGTGGCTGG TCAAGGAAGG CGATAAGGTC AAATCCGGCG ACGTGATCGC CGAGATCGAG
ACCGACAAGG CGACGATGGA AGTGGAAGCC GTCGATGAGG GCACGGTCGC CAAAATCGTC
GTTCCCGCCG GAACCGAAGG CGTCAAGGTC AATGCGTTGA TCGCGGTTCT CGCCGCTGAT
GGCGAGGACG TTGCCACCGC TGCCAAGGGT GGCAACGGGG CGGCGGGAGA AACCGCCGCA
ACGAAGCCGC AGGAAACGGC GGAAGCAGCA CCCGCCGCGG CAAAGGCGCC CGCGGAAGCA
AAGGCACCCG CCGAAGCGAA CGCCCCGCAG GCGGACGCAC CGGCACCGCA AGCAGCCTCG
CCCACACCGG CCGCAGGCGA CGGGAAGCGG ATCTTTTCTT CGCCGCTGGC GCGCCGCCTC
GCCAGGGAGG CGGGTATCGA CCTGTCGGCA ATCGCCGGGT CCGGGCCGCA TGGCCGCGTC
ATCAAGAAGG ATGTCGAGGC CGCCGCTTCC GGCGGTGCCG CCAAGACCGC CGCTGCTCCG
GCAGCAGCTC CGGCCCCGTC GGCGCCTGCC AAGGGCATGT CGGAAGATGC GGTGTTGAAG
CTCTTCGAGC CAGGCTCCTA CGAGCTCGTG CCGCATGACG GCATGCGCAA GACGATCGCC
AAGCGCCTCG TCGAATCGAA GCAGACGATC CCGCATTTCT ACGTCTCGGT CGATTGTGAA
CTCGACGCGT TGCTGGCACT GCGCGCCCAG CTGAATTCCG CAGCACCTGA AAAAGACGGT
AAGTCGGTCT ACAAGCTTTC CGTCAACGAC ATGGTGATCA AGGCGTTGGC CCTGGCGCTG
CGTGACGTCC CGGATGCGAA TGTCTCCTGG ACGGATCAGA ACATGGTCAA GCACAAGCAC
GCGGATGTCG GCGTTGCCGT CTCCATTCCC GGCGGCCTGA TCACCCCCAT CATCCGCCAG
GCGGAATTGA AAAGCCTCTC GGCGATTTCC AACGAGATGA AGGACCTCGG CAAGCGGGCG
AAAGAGCGCA AGCTCAAGCC GGAAGAATAT CAGGGCGGCA CCACGGCCGT CTCCAATATG
GGCATGATGG GCGTCAAGAA CTTCGCAGCA GTCGTCAATC CGCCGCACGC GACGATCCTC
GCGGTCGGTG CCGGCGAGGA ACGCGTCGTC GTCAAGAACA AGGAGACGGT CATCGCCAAT
GTGATGACCG TGACGCTTTC GACGGATCAT CGCTGCGTGG ACGGGGCATT GGGCGCCGAA
CTGCTCGCCG CCTTCAAGCG CTACATCGAA AGCCCGATGG GCATGCTCGT CTGA
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| Protein sequence | MPINITMPAL SPTMEEGNLA KWLVKEGDKV KSGDVIAEIE TDKATMEVEA VDEGTVAKIV
VPAGTEGVKV NALIAVLAAD GEDVATAAKG GNGAAGETAA TKPQETAEAA PAAAKAPAEA
KAPAEANAPQ ADAPAPQAAS PTPAAGDGKR IFSSPLARRL AREAGIDLSA IAGSGPHGRV
IKKDVEAAAS GGAAKTAAAP AAAPAPSAPA KGMSEDAVLK LFEPGSYELV PHDGMRKTIA
KRLVESKQTI PHFYVSVDCE LDALLALRAQ LNSAAPEKDG KSVYKLSVND MVIKALALAL
RDVPDANVSW TDQNMVKHKH ADVGVAVSIP GGLITPIIRQ AELKSLSAIS NEMKDLGKRA
KERKLKPEEY QGGTTAVSNM GMMGVKNFAA VVNPPHATIL AVGAGEERVV VKNKETVIAN
VMTVTLSTDH RCVDGALGAE LLAAFKRYIE SPMGMLV
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