| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1077 |
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| Symbol | |
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| ID | 5321923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1145546 |
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| End bp | 1146943 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640790019 |
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| Product | pyruvate dehydrogenase subunit beta |
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| Protein accession | YP_001326764 |
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| Protein GI | 150396297 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
[COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.406758 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGTAG AAATCCTGAT GCCTGCCCTT TCCCCGACCA TGGAGGAAGG CACGCTCTCC
AAGTGGCTGA AGAATGAGGG AGACAAGGTC TCCTCCGGCG ACGTCATCGC CGAAATCGAA
ACCGACAAGG CGACCATGGA AGTGGAAGCC GTTGACGAGG GGACGATCGG CAAACTGCTG
ATCGCGGCCG GCACCGAAGG CGTGAAGGTG AACACGCCGA TCGCCGTATT GCTGCAGGAC
GGCGAAGCCG CAAGCGACAT CGATACCGCG AAGGCCGAGG CGCCGAAAGC GGAAGCTCCG
AAAGCCGAAG CGCCGAAGCA GGGCGATCCT GAAGCGCCTG CCGCTTCTGC AGCGCCCGTT
GCGGCGCAGC CCAGGGCGGA CGTTCCTTCC GATCCGGCAA TTCCGGCCGG AACCGAGATG
GTGACGATGA CCGTCCGCGA AGCGCTTCGC GATGCGATGG CCGAAGAAAT GCGCGCCAAT
GACGATGTCT TCGTCATGGG CGAAGAGGTC GCCGAATACC AGGGCGCCTA CAAGATCACG
CAGGGCCTTT TGCAGGAATT CGGAGCCCGC CGCGTCGTCG ACACGCCGAT TACGGAACAT
GGCTTTGCCG GCGTCGGCGT CGGTGCTGCG ATGACGGGTC TGCGCCCGAT CGTCGAATTC
ATGACCTTCA ACTTCGCCAT GCAGGCGATT GATCAGATCA TCAATTCGGC CGCAAAGACG
CTGTATATGT CCGGCGGCCA GATGGGTGCA CCGATCGTCT TCCGCGGCCC GAGCGGCGCT
GCCGCGCGCG TCGCCGCGCA GCACTCGCAG TGCTACGCCG CCTGGTATAG CCATATTCCG
GGGCTGAAGG TGGTGATGCC CTATACGGCC GCGGATGCCA AGGGCCTGCT CAAGGCCGCG
ATCCGGGATC CGAATCCGAT TATCTTCCTC GAAAACGAAA TCCTTTACGG TCAGTCCTTC
GATGTTCCGA AGCTCGACGA TTTCGTGCTG CCGATCGGCA AGGCCCGCAT CCATCGCGCC
GGCAAGGACG CGACGCTCGT CTCCTTCGGC ATCGGCATGA CCTATGCGAT CAAGGCCGCG
GCGGAACTGG AGGCGCAGGG GATCGATGTG GAGATCATCG ATCTTCGCAC CATCCGTCCG
ATGGACCTGC CGACCGTCAT CGAATCGGTC AAGAAGACCG GCCGCCTCGT CACGGTCGAA
GAGGGCTATC CGCAGTCTTC CGTCGGCACC GAAATCGCAA CCCGGGTGAT GCAGCAGGCC
TTCGACTATC TCGACGCACC GGTGCTGACG ATCGCCGGCA AGGACGTGCC GATGCCCTAT
GCGGCCAATC TTGAAAAGCT CGCATTGCCG AGCGTCGCCG AAGTCGTCGA GGCGGTGAAA
GCCGTCTGCT ACAAATAA
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| Protein sequence | MPVEILMPAL SPTMEEGTLS KWLKNEGDKV SSGDVIAEIE TDKATMEVEA VDEGTIGKLL
IAAGTEGVKV NTPIAVLLQD GEAASDIDTA KAEAPKAEAP KAEAPKQGDP EAPAASAAPV
AAQPRADVPS DPAIPAGTEM VTMTVREALR DAMAEEMRAN DDVFVMGEEV AEYQGAYKIT
QGLLQEFGAR RVVDTPITEH GFAGVGVGAA MTGLRPIVEF MTFNFAMQAI DQIINSAAKT
LYMSGGQMGA PIVFRGPSGA AARVAAQHSQ CYAAWYSHIP GLKVVMPYTA ADAKGLLKAA
IRDPNPIIFL ENEILYGQSF DVPKLDDFVL PIGKARIHRA GKDATLVSFG IGMTYAIKAA
AELEAQGIDV EIIDLRTIRP MDLPTVIESV KKTGRLVTVE EGYPQSSVGT EIATRVMQQA
FDYLDAPVLT IAGKDVPMPY AANLEKLALP SVAEVVEAVK AVCYK
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