| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1076 |
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| Symbol | |
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| ID | 5321922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1144482 |
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| End bp | 1145528 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640790018 |
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| Product | dehydrogenase E1 component |
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| Protein accession | YP_001326763 |
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| Protein GI | 150396296 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | [TIGR03182] pyruvate dehydrogenase E1 component, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.415529 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCCGC GAAAAACCGC GTCCGTTTCC AGCCGCAAAA CCGCTGCCAA GCCGGTCAAG
AAAGATTTTG CCGGCGGCAC GATCGCCGAG TTCTCCAAGG AAGACGATCT CAAGGCTTAC
CGCGAAATGC TGTTGATCCG GCGTTTCGAG GAAAAGGCCG GCCAGCTTTA TGGCATGGGG
TTCATCGGCG GTTTCTGTCA CCTCTATATC GGCCAGGAAG CCGTCGTCGT CGGCATGCAG
CTTGCCTTGA AAGAGGGCGA TCAGGTCATC ACCGGCTATC GTGACCACGG CCACATGCTC
GCCTGCGGCA TGAGTGCGCG CGGCGTGATG GCGGAGCTCA CCGGTCGCCG TGGCGGCCTT
TCCAAGGGGA AGGGCGGCTC GATGCATATG TTCTCCAAGG AAAAACACTT CTATGGCGGT
CACGGCATCG TCGGTGCGCA GGTTTCGCTC GGCACCGGCC TTGCCTTCGC CAACAGATAT
CGCGGCAACG ACAATGTCAG CCTCGCCTAT TTCGGCGACG GTGCGGCCAA TCAGGGCCAG
GTCTATGAGA GCTTCAACAT GGCCGCTCTC TGGAAATTGC CGGTGATCTA CATCGTCGAA
AACAACCGCT ATGCCATGGG TACCTCCGTG TCGCGTGCCT CGGCGCAGAC CGACTTCTCC
CAGCGCGGCG CATCCTTCGG CATTCCGGGC TATCAGGTGG ACGGCATGGA TGTCCGCGCC
GTCAAGGCCG CAGCCGACGA GGCGGTGGAG CATTGCCGTT CCGGCAAGGG GCCGATCATC
CTTGAGATGC TGACCTACCG CTACCGCGGC CATTCGATGT CCGATCCGGC GAAGTATCGC
TCGAAGGACG AAGTACAGAA GATGCGTTCG GAGCATGATC CGATCGAGCA GGTGAAGGCC
CGCCTCATGG ATAAAGGCTG GGCCACCGAG GATGAGCTGA AGCAGATCGA CAAGGAGGTT
CGCGACATCG TCGCGGACAG TGCCGATTTC GCCCAGTCTG ATCCGGAGCC GGATGTTTCC
GAGCTCTACA CCGATATCCT GCTTTGA
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| Protein sequence | MAPRKTASVS SRKTAAKPVK KDFAGGTIAE FSKEDDLKAY REMLLIRRFE EKAGQLYGMG
FIGGFCHLYI GQEAVVVGMQ LALKEGDQVI TGYRDHGHML ACGMSARGVM AELTGRRGGL
SKGKGGSMHM FSKEKHFYGG HGIVGAQVSL GTGLAFANRY RGNDNVSLAY FGDGAANQGQ
VYESFNMAAL WKLPVIYIVE NNRYAMGTSV SRASAQTDFS QRGASFGIPG YQVDGMDVRA
VKAAADEAVE HCRSGKGPII LEMLTYRYRG HSMSDPAKYR SKDEVQKMRS EHDPIEQVKA
RLMDKGWATE DELKQIDKEV RDIVADSADF AQSDPEPDVS ELYTDILL
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