Gene Smed_1072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1072 
Symboleno 
ID5321918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1140235 
End bp1141509 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content63% 
IMG OID640790015 
Productphosphopyruvate hydratase 
Protein accessionYP_001326760 
Protein GI150396293 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0148] Enolase 
TIGRFAM ID[TIGR01060] phosphopyruvate hydratase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0800339 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.638851 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCAA TCATCGACAT CATCGGCCGA GAGATCCTCG ACAGCCGCGG CAACCCGACC 
GTCGAGGTCG ATGTCCATCT CGAGGACGGC AGTTTCGGTC GCGCGGCGGT TCCCTCGGGC
GCCTCGACCG GTGCTCATGA AGCGGTCGAA CTGCGCGATG GCGGCACGCG CTATCTCGGC
AAGGGCGTAG AGCGCGCCGT CGATGCGGTG AACGGCGAGA TCTTCGAAGC GATCGGCGGC
CTCGACGCTG AAAACCAGAT CCAGATCGAC AGAACCATGT TCGAGCTCGA CGGCACCCCG
AACAAGTCGC GCCTTGGCGC CAACGCCATT CTGGGCGTTT CCCTCGCCGT GGCGAAGGCC
GCTGCGGAAG CCGCCGGGCT GCCGCTCTAC CGCTATGTCG GCGGACCGAA CGCGCATCTG
CTTCCGGTGC CGATGATGAA CATCATCAAT GGCGGTGCGC ATGCCGACAA TCCGATCGAC
TTTCAGGAAT TCATGATCAT GCCGGTCGGA GCCGAAACCC TGAAGGACGC CGTCCGCATG
GGATCGGAAG TCTTCCACAC GCTGAAGAAG CAGCTTGCGG CGGATGGCCA CAACACCAAT
GTCGGTGACG AAGGCGGCTT CGCGCCCGGC CTCGCCTCAG CGCCGGCGGC TCTCGACTTC
ATCATGAAGT CGATCGAGAA GGCCGGCTAC AGGCCCGGCG AAGACATGTA TGTCGCTCTC
GACTGCGCTT CGACGGAATT CTTCAAGGAC GGCAAATACG TCCTCGAGGG TGAAGGCCGC
ACGCTGGAGC CGGGCGCCAT GGCCGAATAC CTGGCGGAGC TTGCCGGCAA ATATCCGATC
GTCTCGATCG AAGACGGCAT GGCCGAAGAT GATTGGGACG GCTGGAAAGC CCTGACGGAC
CTCATCGGCA ACAAGTGCCA GCTCGTCGGC GACGACCTGT TCGTGACCAA TTCCGCGCGT
CTGCGCGACG GCATCAAGAT GGGCGTTGCC AACTCGATCC TCGTCAAGGT CAATCAGATC
GGTTCGCTTT CGGAAACGCT CGACGCGGTC GAGACCGCGC ACAAGGCGCG CTATACGGCC
GTCATGTCGC ACCGCTCCGG CGAAACCGAG GATTCGACGA TTGCCGATCT CGCGGTCGCG
ACCAATTGCG GCCAGATCAA AACCGGTTCG CTCGCTCGCT CCGACCGGCT TGCCAAGTAC
AACCAGCTGA TCCGTATCGA AGAGCAGCTC GGCCCGCAGG CGCAATATGC CGGCCGGTCG
ATCCTGCGCG GCTGA
 
Protein sequence
MTAIIDIIGR EILDSRGNPT VEVDVHLEDG SFGRAAVPSG ASTGAHEAVE LRDGGTRYLG 
KGVERAVDAV NGEIFEAIGG LDAENQIQID RTMFELDGTP NKSRLGANAI LGVSLAVAKA
AAEAAGLPLY RYVGGPNAHL LPVPMMNIIN GGAHADNPID FQEFMIMPVG AETLKDAVRM
GSEVFHTLKK QLAADGHNTN VGDEGGFAPG LASAPAALDF IMKSIEKAGY RPGEDMYVAL
DCASTEFFKD GKYVLEGEGR TLEPGAMAEY LAELAGKYPI VSIEDGMAED DWDGWKALTD
LIGNKCQLVG DDLFVTNSAR LRDGIKMGVA NSILVKVNQI GSLSETLDAV ETAHKARYTA
VMSHRSGETE DSTIADLAVA TNCGQIKTGS LARSDRLAKY NQLIRIEEQL GPQAQYAGRS
ILRG