| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1071 |
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| Symbol | |
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| ID | 5321917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1139283 |
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| End bp | 1140122 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640790014 |
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| Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
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| Protein accession | YP_001326759 |
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| Protein GI | 150396292 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
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| TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.509149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACCA ATTCGAGAGT GGTCGTCGGC GAAGGTGCCG GCCAGGTGGT GTTCTCGCAG
AAGGAGCGGC TGACGCTTAT CGCCGGACCC TGCCAGATGG AAAGCCGCGA ACACGCCTTC
ACGATTGCGG GAAAGCTTGT CGAGCTCTGT AGATCGCTCG GGATCGGCCT CGTCTACAAG
TCCTCTTTCG ACAAGGCGAA CCGCACGTCC CTCTCCGGAA AGCGCGGCAT CGGGCTCGAC
AATGCGATGG AAGTCTTTGC CGACCTCAAG CGTGAATTCG GCTTCCCGGT CCTGACCGAT
ATCCATACGG AAGAGCAATG CGCGCTGGTC GCCGAGACGG TGGACATCCT GCAGATCCCC
GCCTTTCTGT CGCGCCAGAC TGACCTTCTC GTCGCTGCCG CGAAGACGGG GCGCGCGATC
AACGTCAAGA AGGGCCAGTT TCTCGCCCCC TGGGACATGA AGAACGTGCT CGCCAAATTT
ACGCAGAGTG GCAATCCCAA TGTGCTCCTC TGCGAACGCG GCGCCTCCTT CGGCTATAAT
ACGCTGGTCT CCGACATGCG CTCGCTGCCG ATCATGGCGG CACTCGGCGC TCCCGTGGTC
TTCGATGCGA CGCATTCCGT GCAGCAGCCA GGCGGCCAGG GCGGTTCTTC CGGTGGCCAG
CGCGAGTTCG TCGAAACGCT GGCGCGTGCG GCGGTGGCCG TCGGCGTCGC CGGGGTCTTC
GTTGAGACCC ACGAGGATCC CGACAACGCT CCCTCGGACG GTCCGAACAT GGTGCCGCTG
AAGGACATGC CGCGGCTGCT GGAGAAACTG CTTGCCTTTG ACGCGATCGC CAAAGGGTGA
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| Protein sequence | METNSRVVVG EGAGQVVFSQ KERLTLIAGP CQMESREHAF TIAGKLVELC RSLGIGLVYK
SSFDKANRTS LSGKRGIGLD NAMEVFADLK REFGFPVLTD IHTEEQCALV AETVDILQIP
AFLSRQTDLL VAAAKTGRAI NVKKGQFLAP WDMKNVLAKF TQSGNPNVLL CERGASFGYN
TLVSDMRSLP IMAALGAPVV FDATHSVQQP GGQGGSSGGQ REFVETLARA AVAVGVAGVF
VETHEDPDNA PSDGPNMVPL KDMPRLLEKL LAFDAIAKG
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