Gene Smed_1066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1066 
Symbol 
ID5321912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1134269 
End bp1134895 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content62% 
IMG OID640790009 
Productcytochrome B561 
Protein accessionYP_001326754 
Protein GI150396287 
COG category[C] Energy production and conversion 
COG ID[COG3038] Cytochrome B561 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.174468 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGCA ACAGCAAGGA TCGGTTTGGA ACCGTGACGA TCGTCCTTCA CTGGACGATT 
GCGGTTCTGA TCCTTGGCCT CCTCCTCACG GGGTTGGTCA TGCGGCGCAC CGAGATCGAC
CCGGCTTTGC AGTTTTCCCT CTATCAATGG CACAAATCCT TCGGTTTCAT TGCTTTGGGG
CTGGCTGCAC TTCAGGCCCT CCGGTGGCTC GTGGAGCGGA GTCCGGCGCC CCCGCCGACC
CTCGGTCCGA TGGAGCAGAT GGCGTCCCGG GCAGCGCATC TGTCGCTCAT CGCGCTCGCA
CTTCTCGTGC CGCTTGCCGG CTGGGCAGTC GCATCCGCCT CCACGCTGGC AATCCCGAGC
TTCTTTTTCA ACCTGATCGT AATTCCGCAT CTGCCGCTTC CGAGGTCGGA GACTTCGGAG
GCATTTTTCG CCCTGGCCCA CGCCACGCTT GCCTATGCGA CCCTTGCCCT CGTCGCTGTT
CACGCGGCGG CGGCCATCTA CCACCATTTC CTAGGGCGCG ACGAAGTGCT GGTCCGTATG
CTTCGCTCCG GTTCCGCGCC ACGCCCTGAC AGCACGATCA GCGCACCCGA AAAGGACGAC
ACCCTTGTCG AGAGGAAACG AAGATGA
 
Protein sequence
MLRNSKDRFG TVTIVLHWTI AVLILGLLLT GLVMRRTEID PALQFSLYQW HKSFGFIALG 
LAALQALRWL VERSPAPPPT LGPMEQMASR AAHLSLIALA LLVPLAGWAV ASASTLAIPS
FFFNLIVIPH LPLPRSETSE AFFALAHATL AYATLALVAV HAAAAIYHHF LGRDEVLVRM
LRSGSAPRPD STISAPEKDD TLVERKRR