Gene Smed_1059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1059 
Symbol 
ID5321905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1126705 
End bp1127838 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content64% 
IMG OID640790002 
Producthypothetical protein 
Protein accessionYP_001326747 
Protein GI150396280 
COG category[S] Function unknown 
COG ID[COG5330] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.835096 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCATAC AAGCATTTCT TTGCTGGGTG GAGACGGCAA AAGCCGGGGA TCGCGCCAGC 
GCTGCCAGTG CGCTTGGCCG CGCCTATGCC AAGGCCGGGA CGAACGGCGT CGATCCACAG
GCAGTCGAGA TGGCGATGAC CTTTCTCCTC GACGACCCTT CCCCCAAAGT ACGCCTTTCT
CTGGTCGAGG CGCTGGCCGA TTGCCCAACC GCACCGCGCG CGATCATCAA GGCGCTTGCG
CAGGACCAGC CGGAAATCGC CTACATCGCC ATTTCGCGTT CCCCTGTTCT GAATGACGAC
GATCTTGTCT ACATGTCGGC GAACGGCGAC GCGGAGATGC GGGCGCTGAT CGCGTCCCGC
GCCACGGTCT CGCGCGCGCT TGCGGCGGCA ATCGCTGAAA TCGGCGGCGA GGAAGAGGTG
CTTATTCTGC TGGAAAATCC AGGTGCCGGG CTTTCGCCCG GGTCGCTGCG GAGAATTGCG
GACCGTCTCG GGGATTGCGT GGTCACTCGT GGCCTGTTGC TCGAACGCGA TGACCTGCCG
AGTGACGTTC GCCAAAGCCT TGCGGAGAAA GTAGCCACTG CGCTTGCGGC TTCGGGCTTG
GTGCGATCCG CTATCGGCCA GGAACGGGCG CGGCGTGTAG CGCAGGAATC TTGCGACGCG
GCGGCGCTGG CGCTTTCTTC GGATGCGTCG AAGGAGGAAC TGCAGCGGCT GGTTGCCCGT
CTCCGCAACG CCGGCCGGTT GACGCCGGCC TTGCTGCTGA CGGCGCTCTG CAGCGGCCGG
ACGGAGCTCT TTTCTGCGGC AATCGTCGAC CTGTCAGGAG TCCCGGAAAA GCGCGTTCGG
GCGATCCTTT CGGGCGGGCG GTTCCATTCG GTCAGGGCCC TTCTTGAAAG TGCGGGATTG
GGCCGTGACG TGAGCGGCGT CTTTTCGGAG GCCGTGTTGT TCTGTCAAAG CGAGGCAGAT
CCGGACCGTG ACGGGGTTTC CCCCTCAGTC GCAGCGAGAC TTTCCGATCG CCTTCGCGAT
TGCAGCCTCG ATGCATTGCA CGCCGTTGCC GAACTTGCAG AGCGGCTGGC TTTCGCCGAG
CAGCGGCAGA GGGCGCGCAA CTATGCATCG CGGTTCTCCC GCCAGGCCGC CTGA
 
Protein sequence
MIIQAFLCWV ETAKAGDRAS AASALGRAYA KAGTNGVDPQ AVEMAMTFLL DDPSPKVRLS 
LVEALADCPT APRAIIKALA QDQPEIAYIA ISRSPVLNDD DLVYMSANGD AEMRALIASR
ATVSRALAAA IAEIGGEEEV LILLENPGAG LSPGSLRRIA DRLGDCVVTR GLLLERDDLP
SDVRQSLAEK VATALAASGL VRSAIGQERA RRVAQESCDA AALALSSDAS KEELQRLVAR
LRNAGRLTPA LLLTALCSGR TELFSAAIVD LSGVPEKRVR AILSGGRFHS VRALLESAGL
GRDVSGVFSE AVLFCQSEAD PDRDGVSPSV AARLSDRLRD CSLDALHAVA ELAERLAFAE
QRQRARNYAS RFSRQAA