Gene Smed_1053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1053 
Symbol 
ID5321899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1120897 
End bp1121436 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content60% 
IMG OID640789996 
Producthypothetical protein 
Protein accessionYP_001326741 
Protein GI150396274 
COG category[S] Function unknown 
COG ID[COG3797] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGACCT ACATTGCCTT GCTTCACAGC ATCGTTCTTG GCGAGGGCCG TCGCGTTGTG 
ATGTCCGACT TGAAGGAGGT GGCCGAAGGC CTCGGCTACA AAAGGCCGCG CACGCTTGTT
GCCACGGGCA ATCTCCTGTT CGAAGCTCCC GTCAAACCGC TGGTCGAGAT CGAAACCGAA
CTCGAGAGGG CTTTTGAAAA GGCCTTCGGT CGTCACGTCG ACATCATCCT CCGTTTCGCC
GAGGATTGGG TGAGGCTTGC GGATGGCAAC CCGTTTCTTC CGGAAAGCGA AAAGGACCCG
TCAAACGTGC ATGTGCGGGT CATGCGCTCT CCTCTCGAAA TCGAGGTGCA GGGAAAACTG
GTCGGCTATT GCTCCAGAGG CGAGCGCGTG GCAATCGTCG GCGGCGATCT CTGGATCGAT
TTTGCGGGCA GGGCGAGCGG CTCGAAATTG CTCGGTGCGC TGACGACCAG ACGGCTGGGC
ATCGGGACGT TGCGCAACTG GAATACGGTC AGAGGCCTGC GCAGAATGGC CGGCGGCTGA
 
Protein sequence
MRTYIALLHS IVLGEGRRVV MSDLKEVAEG LGYKRPRTLV ATGNLLFEAP VKPLVEIETE 
LERAFEKAFG RHVDIILRFA EDWVRLADGN PFLPESEKDP SNVHVRVMRS PLEIEVQGKL
VGYCSRGERV AIVGGDLWID FAGRASGSKL LGALTTRRLG IGTLRNWNTV RGLRRMAGG