Gene Smed_1051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1051 
Symbol 
ID5321897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1120138 
End bp1120467 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content65% 
IMG OID640789994 
Producthypothetical protein 
Protein accessionYP_001326739 
Protein GI150396272 
COG category[S] Function unknown 
COG ID[COG0759] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00278] conserved hypothetical protein YidD 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACCG CACAGAGCCG GAACTGGTCC GGACCGTTCC GCAAGACGCC AGGGCGGCTC 
GTGGGCATGG CCCTGATTCG CGCCTATCAA CTCACGCTGT CGAGTTTGAT CGGCAATTCC
TGCCGGCATC TGCCGACCTG TTCCGAATAC GGCTTCGAGG CAATCGCCCG ATATGGCCTC
TGGGCCGGTG GATGGCTGAC GTTGTTCCGG GCGGTCCGTT GCGGACCCGG CGGAACGCAT
GGGTTCGATC CGGTGCCGGA AACGCTCGCG GCTCGCCAGC ACTGGTTTAC GCCCTGGCGC
TACTGGCAAC CGCGCAGAAA GGACGCGTGA
 
Protein sequence
MRTAQSRNWS GPFRKTPGRL VGMALIRAYQ LTLSSLIGNS CRHLPTCSEY GFEAIARYGL 
WAGGWLTLFR AVRCGPGGTH GFDPVPETLA ARQHWFTPWR YWQPRRKDA