Gene Smed_1048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1048 
SymbolhisI 
ID5321894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1118131 
End bp1118586 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content61% 
IMG OID640789991 
Productphosphoribosyl-AMP cyclohydrolase 
Protein accessionYP_001326736 
Protein GI150396269 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0139] Phosphoribosyl-AMP cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.980387 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACCC TCACTTTCGC TTCCCCCCCG CAGAACAAGT CCGACCTGGA AACCGGTCCG 
GCCTTCACCC CGCGTTTCGA CGAGAAGGGC CTTATCACGG CCGTCGTGAC CGATGCAGGC
GATGGCGCGT TGCTGATGGT CGCGCACATG AATGCGGAGG CTCTGGCCCT GACGCTCGAG
ACCGGAGTGG CGCATTACTA CAGTCGCTCA CGCCGCCGGC TATGGAAAAA GGGCGAGAGC
TCGGGCAACG TGCAGGCCGT CCGTGAGATT CGAACCGATT GCGATCAGGA TGCCATCTGG
CTGAAGGTCT CGGTCGCCGG CCACGATGCC ACCTGCCATA CGGGACGCCG CTCCTGTTTT
TACCGAACGG TCGGCGTCGA CGAAGGGCAG GCAAAATTGG TGATCACCGA CGACGAAAGA
CACTTCGATC TGAAGCAGGT CTACGCCGAA AGCTGA
 
Protein sequence
MMTLTFASPP QNKSDLETGP AFTPRFDEKG LITAVVTDAG DGALLMVAHM NAEALALTLE 
TGVAHYYSRS RRRLWKKGES SGNVQAVREI RTDCDQDAIW LKVSVAGHDA TCHTGRRSCF
YRTVGVDEGQ AKLVITDDER HFDLKQVYAE S