Gene Smed_1044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1044 
Symbol 
ID5321890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1114277 
End bp1114879 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content61% 
IMG OID640789987 
Producthypothetical protein 
Protein accessionYP_001326732 
Protein GI150396265 
COG category[S] Function unknown 
COG ID[COG5388] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAGCA GAACGACAGT GGAGCTGTTC CAATATTGGA ACGACGTCCG GGGCAACCGC 
GATCTCCCGC GCCGTGATGA GATACAGCCG GGGGATATAC GGTCCCTTCT GCCGAACGTC
TTCATCCTGC AGACAGAGCC GGCCGGCGGC ATTTATTTTC GCCTCGCGGG CACCAACATC
TGCAGTCTGT TTGGCAATGA ACTTCGCCAT CGGCAATTCT CCTCCTTGTG GCGCGGCGAT
CAACAGGAAG ACATTGGCCG GATCGCCCGG CAGGCCATCG AATCCTGCAC TCCGATAGTC
CTCGCCGCGT CCGGCGCCAC CGCAGCCGGG GATTGGCTGG ACCTGGAAAT ACTGATGACG
CCCCTCGCCT CTCGCGACGG CAAGGGCGAC CGTGTACTCG GCGCGCTGTC GCCGCTGTCC
GGTCCGATGT GGCTGCACAT GATGCCATTG CAGCACCTCA TGCTGGAGCA AGTTCAGGAA
AACTCCGAAG TGCCGGAAAT GCTCACCCGA GCGGGTAACA CAGTGATCCG CCTTGACACA
CACCGTTCTC CGATCCGTAG GGCGCAACAC CTTCCGGTAT TCGAGGGCGG AAGACGGAAT
TGA
 
Protein sequence
MRSRTTVELF QYWNDVRGNR DLPRRDEIQP GDIRSLLPNV FILQTEPAGG IYFRLAGTNI 
CSLFGNELRH RQFSSLWRGD QQEDIGRIAR QAIESCTPIV LAASGATAAG DWLDLEILMT
PLASRDGKGD RVLGALSPLS GPMWLHMMPL QHLMLEQVQE NSEVPEMLTR AGNTVIRLDT
HRSPIRRAQH LPVFEGGRRN