| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1042 |
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| Symbol | |
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| ID | 5321888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1112475 |
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| End bp | 1113083 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640789985 |
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| Product | transglutaminase family protein cysteine peptidase BTLCP |
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| Protein accession | YP_001326730 |
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| Protein GI | 150396263 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3672] Predicted periplasmic protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.115252 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCACAA TCATCACCAT GGCAATCGCC GCCGCAGCCA TCGCCACCGG CCTTATGGCC
GCGCCGGCCT TCGCGGTACC GGTGAACATG ACGGTCAGCG GCGCGACCAA CCCGCCAATT
GGGCATTACG AATTCTGCAA GACCGCTCCT TCCGAATGCG CGGCCATCGG CGCCGATCAC
GGTCCGGCCG TGCTGACGCG CGAAGGCTGG AGAAAGATCC TCGAAGTCAA TTACGAGGTG
AACCAGGCCG TCGTTCCGAT GACCGATATG GAAATTCACG GCGTCGAGGA AATCTGGTCC
TATCCGGATG CCGTGGGCGA CTGCGAGGAT TACGTCCTCT TGAAACGCCG CAAGCTGATC
GAAAGCGGCT TCTCGCCTGC CGATCTCCTG ATCACCGTCG TCCTGCAGCC GAATGGCGAT
GGCCACGCGG TCCTGACGGT CCGGACCGAC CGCGGGGATT TCATTCTCGA CAACATGCGT
AGCAAGGTTT TGCTGTGGTC GGATACGGAA TATACCTACC TCAAACGGCA GTCCTCGGAG
CATGCCGGCC GCTGGGTCAA GCTGCAAGAC GGACGCGCTA TCGCGGTTGG TAGTGTCAGC
GCAAATTAA
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| Protein sequence | MRTIITMAIA AAAIATGLMA APAFAVPVNM TVSGATNPPI GHYEFCKTAP SECAAIGADH
GPAVLTREGW RKILEVNYEV NQAVVPMTDM EIHGVEEIWS YPDAVGDCED YVLLKRRKLI
ESGFSPADLL ITVVLQPNGD GHAVLTVRTD RGDFILDNMR SKVLLWSDTE YTYLKRQSSE
HAGRWVKLQD GRAIAVGSVS AN
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