Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1035 |
Symbol | |
ID | 5321881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1104889 |
End bp | 1105986 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640789978 |
Product | hypothetical protein |
Protein accession | YP_001326723 |
Protein GI | 150396256 |
COG category | [S] Function unknown |
COG ID | [COG3503] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.138536 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCGGCCCT CATTTCAACA CAATCGCGAC GCGACTGAGA CGAGGCCGCC CGCACCAAGC CATTTGCAGC AACAGAGCAC CAAATCAATG TCCGACAGCA GCGCGACGAC GACTCCTGAA GCGCAAGTGC CCGCAGACGC GACGGGAGCC AAGCGGATCG CTCTTCTCGA CGCGCTGCGC GGCCTGGCTC TCGTCGCCAT GGCTGTATAT CACTTTGTCT GGGACCTCGA ATTCTTCGGC TATGTGGCGG CCGGCACCGC AGGGACTGGC GGGTGGCGGA TGTTTGCGCG CCTGATTGCC AGCAGCTTCC TTTTCCTTGC CGGCTACAGC CTCGTGCTCG GACAATATCC GAAATTCCGT CCGCGCGCCT TCGCCATGCG TTTCGCGAAG ATCGCGGGCG CCGCCGCGCT GATCAGCGTG GGGACCTGGT TCGCCTTCCG TCATTCCTTC ATCTTCTTCG GCATTCTCCA CTCTATCGCG GCGGCAAGCC TCGTCGGCCT CCTGTTCCTC AGATTGCCGG CCGCCACTTC CTTTCTTGCA GCTGCCGCGG CCTTCGCAGC GCCCTACTAT CTGCGCTCAT CATACTTCGA TACGCCGGCG TTGTGGTGGG TCGGCCTTTC GGAAACGATC CCTCGCTCGA ATGACTACGT CCCTCTCTTT CCGTGGCTCG CACCTTTCCT GGTCGGGCTT GGCTGCGCGA AGCTGCTTCA CCCGGTGCTT TCCGCTCGGC GTCGCAGTCG AGGCTCCGCA ACCGGAAACG CCGTGCTGAT CACATCCCTT GCCTTCGCTG GGCGTCATAG CCTTTTGATA TATCTTGCAC ACCAGCCGCT GCTTCTTGCG GTCGTGTATC TGTTCTCCAT CGCCGTTCCT GCCCCCGCGC CGGATTCGAC CGAGATTTAT CGGCGCAATT GCGAGCAGGC CTGCGGCAGT GAGAATTCCG GAATTTCCTG CAGCAACTTC TGCGGCTGCA CGCTCGATCG TCTGAAGGAG CAGGATCTGT TCGACGATCT GAACCTGGGC AAGATTGATG TCACAACTGA TGAGCGCATC GCGCGTATCG CCGGTCAGTG CACGATGGAG TCGCGCTCTG TGGATTAG
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Protein sequence | MRPSFQHNRD ATETRPPAPS HLQQQSTKSM SDSSATTTPE AQVPADATGA KRIALLDALR GLALVAMAVY HFVWDLEFFG YVAAGTAGTG GWRMFARLIA SSFLFLAGYS LVLGQYPKFR PRAFAMRFAK IAGAAALISV GTWFAFRHSF IFFGILHSIA AASLVGLLFL RLPAATSFLA AAAAFAAPYY LRSSYFDTPA LWWVGLSETI PRSNDYVPLF PWLAPFLVGL GCAKLLHPVL SARRRSRGSA TGNAVLITSL AFAGRHSLLI YLAHQPLLLA VVYLFSIAVP APAPDSTEIY RRNCEQACGS ENSGISCSNF CGCTLDRLKE QDLFDDLNLG KIDVTTDERI ARIAGQCTME SRSVD
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