Gene Smed_1035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1035 
Symbol 
ID5321881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1104889 
End bp1105986 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content61% 
IMG OID640789978 
Producthypothetical protein 
Protein accessionYP_001326723 
Protein GI150396256 
COG category[S] Function unknown 
COG ID[COG3503] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.138536 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGGCCCT CATTTCAACA CAATCGCGAC GCGACTGAGA CGAGGCCGCC CGCACCAAGC 
CATTTGCAGC AACAGAGCAC CAAATCAATG TCCGACAGCA GCGCGACGAC GACTCCTGAA
GCGCAAGTGC CCGCAGACGC GACGGGAGCC AAGCGGATCG CTCTTCTCGA CGCGCTGCGC
GGCCTGGCTC TCGTCGCCAT GGCTGTATAT CACTTTGTCT GGGACCTCGA ATTCTTCGGC
TATGTGGCGG CCGGCACCGC AGGGACTGGC GGGTGGCGGA TGTTTGCGCG CCTGATTGCC
AGCAGCTTCC TTTTCCTTGC CGGCTACAGC CTCGTGCTCG GACAATATCC GAAATTCCGT
CCGCGCGCCT TCGCCATGCG TTTCGCGAAG ATCGCGGGCG CCGCCGCGCT GATCAGCGTG
GGGACCTGGT TCGCCTTCCG TCATTCCTTC ATCTTCTTCG GCATTCTCCA CTCTATCGCG
GCGGCAAGCC TCGTCGGCCT CCTGTTCCTC AGATTGCCGG CCGCCACTTC CTTTCTTGCA
GCTGCCGCGG CCTTCGCAGC GCCCTACTAT CTGCGCTCAT CATACTTCGA TACGCCGGCG
TTGTGGTGGG TCGGCCTTTC GGAAACGATC CCTCGCTCGA ATGACTACGT CCCTCTCTTT
CCGTGGCTCG CACCTTTCCT GGTCGGGCTT GGCTGCGCGA AGCTGCTTCA CCCGGTGCTT
TCCGCTCGGC GTCGCAGTCG AGGCTCCGCA ACCGGAAACG CCGTGCTGAT CACATCCCTT
GCCTTCGCTG GGCGTCATAG CCTTTTGATA TATCTTGCAC ACCAGCCGCT GCTTCTTGCG
GTCGTGTATC TGTTCTCCAT CGCCGTTCCT GCCCCCGCGC CGGATTCGAC CGAGATTTAT
CGGCGCAATT GCGAGCAGGC CTGCGGCAGT GAGAATTCCG GAATTTCCTG CAGCAACTTC
TGCGGCTGCA CGCTCGATCG TCTGAAGGAG CAGGATCTGT TCGACGATCT GAACCTGGGC
AAGATTGATG TCACAACTGA TGAGCGCATC GCGCGTATCG CCGGTCAGTG CACGATGGAG
TCGCGCTCTG TGGATTAG
 
Protein sequence
MRPSFQHNRD ATETRPPAPS HLQQQSTKSM SDSSATTTPE AQVPADATGA KRIALLDALR 
GLALVAMAVY HFVWDLEFFG YVAAGTAGTG GWRMFARLIA SSFLFLAGYS LVLGQYPKFR
PRAFAMRFAK IAGAAALISV GTWFAFRHSF IFFGILHSIA AASLVGLLFL RLPAATSFLA
AAAAFAAPYY LRSSYFDTPA LWWVGLSETI PRSNDYVPLF PWLAPFLVGL GCAKLLHPVL
SARRRSRGSA TGNAVLITSL AFAGRHSLLI YLAHQPLLLA VVYLFSIAVP APAPDSTEIY
RRNCEQACGS ENSGISCSNF CGCTLDRLKE QDLFDDLNLG KIDVTTDERI ARIAGQCTME
SRSVD