Gene Smed_1016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1016 
Symbol 
ID5321861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1087470 
End bp1087784 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content59% 
IMG OID640789958 
Productsmall multidrug resistance protein 
Protein accessionYP_001326704 
Protein GI150396237 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2076] Membrane transporters of cations and cationic drugs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0543961 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.555667 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTGGT TCACGCTACT GCTCGCCGGA ATCCTCGAAA TCGGCTGGGC GATTGGTCTT 
AAATACACGG ATGGGTTTAC GCGGCTCATG CCGACTGTGC TGACGGTCGG TTCGATGATC
CTGAGCGTCG CCCTGCTCGG AATAGCGGTT CGTTCACTGC CGCTTGGAAC TGCCTATGCG
GTCTGGACCG GGATAGGCAC TGTCGGGACC GTAATTCTAG GAATCGTGCT GTTTGCAGAA
CCTGCAACGG CCATGCGCCT CGGCTGCATC GGCCTCATTG TCGCCGGCAT CGCCGGCCTG
AAGCTGGTAG GCTAA
 
Protein sequence
MAWFTLLLAG ILEIGWAIGL KYTDGFTRLM PTVLTVGSMI LSVALLGIAV RSLPLGTAYA 
VWTGIGTVGT VILGIVLFAE PATAMRLGCI GLIVAGIAGL KLVG