| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1015 |
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| Symbol | |
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| ID | 5321860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1086000 |
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| End bp | 1087310 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640789957 |
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| Product | recombination factor protein RarA |
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| Protein accession | YP_001326703 |
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| Protein GI | 150396236 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00103733 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.467953 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACC TCTTCGCCCC CCATGAACCT CCTGAGATGG CCTCGGCAAG GCCACTTGCG
GACCGGCTGC GGCCGCGTAC GCTGGGAGAG GTGACCGGCC AGGAACATCT GACCGGCGCT
GACGGTGGAC TCACCCGGAT GATTGCCTCC GGATCGCTTG GCTCAATGAT CTTCTGGGGA
CCGCCCGGAA CAGGAAAGAC GACCGTTGCC CGTCTGCTTT CAGGCGAAGC CGGCCTTGCC
TTCGAGCAGA TATCGGCGAT CTTCTCCGGC GTGGCGGATT TGAAGAAAGT GTTCGAATCG
GCGCGCGCGC GGCGGATGTC GGGGCGCCAG ACGCTGCTGT TCGTCGATGA GATCCATCGG
TTCAATCGAG CGCAGCAGGA CAGCTTCCTT CCGGTCATCG AGGACGGCAC CGTGATTCTG
GTCGGCGCCA CGACCGAGAA CCCGTCCTTT GAGCTTAACG CCGCGCTTCT GTCGCGCGCG
CGCGTTTTGA CGTTCAAACC GCACGATGAG TCTAGCCTTG AGGAACTCCT GAAACGAGCG
GAGGCGGCCG AGGGAAAATC GCTCCCGCTC GACGGCGACG CGCGGGCGAG CCTGATCCGC
ATGGCGGACG GGGATGGCCG TGCCATACTG ACACTCGCCG AAGAGGTGTG GCGGGCAGCG
CGCCCGGATG AGCTATTCGA TGTCGCGGCG CTTCAGGAGA TCGTTCAGCG CCGCGCACCG
GTTTACGACA AAGGTCAGGA CGGTCACTAC AATCTGATCT CGGCGCTCCA TAAATCCGTT
CGAGGGTCCG ACCCCGATGC GGCACTCTAC TATCTATGCC GCATGTTCGA TGCCGGTGAG
GATCCGCTTT ATATCGGCAG ACGCTTGGTG CGGATGGCGG TCGAGGATAT AGGGCTTGGC
GATCCACAGG CACTGGTGAT CTGCAACGCA GCCAAGGATG CATATGATTA TCTGGGCTCT
CCGGAAGGAG AACTGGCTCT CGCCCAGGCC TGCGTCTATC TCGCGACGGC GCCCAAGTCC
AACGCGGTTT ATACCGCCTA CAAGGCGGCG ATGCGCGCCG CCAGGGAAAA CGGCTCTCTT
CTGCCCCCGA AGCACATCCT CAATGCACCG ACGAAGCTTA TGAAAGGGGA AGGCTACGGC
GACGGGTATC GCTACGATCA CGACGAGCCC GATGCTTTCT CGGGGCAGGA CTATTTCCCT
GAGAAGATGG GCAGAAAGAC CTTTTACGAT CCTCCGGAGC GCGGCTTCGA GCGCGAAATC
CGAAAGCGGT TGGAATGGTG GAACAAGCTT CGGCGTGACC GCAATCCATG A
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| Protein sequence | MSDLFAPHEP PEMASARPLA DRLRPRTLGE VTGQEHLTGA DGGLTRMIAS GSLGSMIFWG
PPGTGKTTVA RLLSGEAGLA FEQISAIFSG VADLKKVFES ARARRMSGRQ TLLFVDEIHR
FNRAQQDSFL PVIEDGTVIL VGATTENPSF ELNAALLSRA RVLTFKPHDE SSLEELLKRA
EAAEGKSLPL DGDARASLIR MADGDGRAIL TLAEEVWRAA RPDELFDVAA LQEIVQRRAP
VYDKGQDGHY NLISALHKSV RGSDPDAALY YLCRMFDAGE DPLYIGRRLV RMAVEDIGLG
DPQALVICNA AKDAYDYLGS PEGELALAQA CVYLATAPKS NAVYTAYKAA MRAARENGSL
LPPKHILNAP TKLMKGEGYG DGYRYDHDEP DAFSGQDYFP EKMGRKTFYD PPERGFEREI
RKRLEWWNKL RRDRNP
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