| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1010 |
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| Symbol | |
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| ID | 5321855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1081123 |
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| End bp | 1082133 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640789952 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_001326698 |
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| Protein GI | 150396231 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.21505 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCAGA AAAATTGGCA GGAATTGATC AAGCCGAACA AGGTGGAGTT CGCCTCCTCC
GGCCGCACCA AGGCAACGTT GGTAGCGGAA CCGCTTGAGC GGGGCTTTGG TCTGACGCTC
GGCAACGCGC TTCGTCGCGT GCTTTTGTCG TCGCTGCGCG GTGCCGCTGT AACCGCGGTT
CAGATCGACG GCGTATTGCA TGAGTTCTCT TCTATCCCGG GCGTCCGGGA AGACGTGACC
GACATCGTGC TCAACATCAA GGAAATCGCC ATCAAGATGG ATGGCGACGA CGCGAAGCGC
ATGGTCGTGC GCAAGCAGGG CCCTGGCGTT GTTACCGCCG GTGACATTCA GACGGTTGGC
GATATCGAGA TCCTCAACCC GAACCACGTG ATCTGCACGC TCGACGAGGG CGCGGAAATC
CGCATGGAGT TCACCGTCAA TAACGGCAAG GGCTATGTAC CGGCTGACCG TAACCGCTCG
GAAGACGCGC CGATCGGGCT CATTCCGGTG GATAGCCTGT ACTCTCCGGT CAAGAAGGTC
TCCTACAAGG TGGAAAACAC CCGTGAAGGC CAGGTTCTCG ACTATGACAA GCTGACGATG
TCCATCGAGA CCGATGGCTC CGTCACGGGC GAAGATGCGA TCGCGTTCGC GGCCCGCATC
CTTCAGGACC AGCTGTCGGT CTTCGTTAAC TTCGACGAGC CGCAGAAGGA AACCGAGGAA
GAGGCGGTCA CCGAACTCGC CTTCAATCCG GCGCTTCTCA AGAAGGTCGA CGAACTGGAG
CTTTCCGTCC GCTCGGCCAA CTGCCTGAAG AACGACAACA TCGTCTATAT CGGCGACCTC
ATTCAGAAGA CCGAAGCAGA AATGCTCCGC ACGCCGAATT TTGGTCGCAA GTCGCTCAAC
GAGATCAAGG AAGTTCTCGC TTCCATGGGC CTGCATCTCG GCATGGAAGT GCCGTCCTGG
CCGCCGGAGA ACATCGAAGA TCTCGCCAAG CGATACGAAG ACCAATATTA A
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| Protein sequence | MIQKNWQELI KPNKVEFASS GRTKATLVAE PLERGFGLTL GNALRRVLLS SLRGAAVTAV
QIDGVLHEFS SIPGVREDVT DIVLNIKEIA IKMDGDDAKR MVVRKQGPGV VTAGDIQTVG
DIEILNPNHV ICTLDEGAEI RMEFTVNNGK GYVPADRNRS EDAPIGLIPV DSLYSPVKKV
SYKVENTREG QVLDYDKLTM SIETDGSVTG EDAIAFAARI LQDQLSVFVN FDEPQKETEE
EAVTELAFNP ALLKKVDELE LSVRSANCLK NDNIVYIGDL IQKTEAEMLR TPNFGRKSLN
EIKEVLASMG LHLGMEVPSW PPENIEDLAK RYEDQY
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