Gene Smed_1009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1009 
Symbol 
ID5321854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1080630 
End bp1081019 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content62% 
IMG OID640789951 
Product30S ribosomal protein S11 
Protein accessionYP_001326697 
Protein GI150396230 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0100] Ribosomal protein S11 
TIGRFAM ID[TIGR03632] 30S ribosomal protein S11 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.636565 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.191083 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGG AAGCCACCCG CGTTCGCCGT CGCGAGCGCA AAAATATTAC GTCTGGCGTC 
GCACACGTCA ATTCGTCGTT CAACAACACG ATGATCACCA TCACCGACGC GCAGGGCAAT
GCCATTGCCT GGTCGTCGGC CGGCGCGAAG GGTTTCAAGG GTTCGCGCAA GTCGACCCCG
TTCGCTGCGC AGATCGCCGC TGAAGACTGC GCCAAAAAGG CACAGGAACA CGGCATGAAG
TCGCTGGAAG TGGAAGTTTG CGGTCCGGGT TCCGGCCGTG AGTCCGCTCT TCGTGCGCTC
CAGGCTGCGG GTTTCATGAT CACGTCCATC CGCGACGTGA CCCCGATCCC GCACAATGGT
TGCCGCCCGC GCAAGAAGCG TCGCGTCTGA
 
Protein sequence
MAKEATRVRR RERKNITSGV AHVNSSFNNT MITITDAQGN AIAWSSAGAK GFKGSRKSTP 
FAAQIAAEDC AKKAQEHGMK SLEVEVCGPG SGRESALRAL QAAGFMITSI RDVTPIPHNG
CRPRKKRRV