| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1006 |
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| Symbol | secY |
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| ID | 5321851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1077882 |
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| End bp | 1079222 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640789948 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_001326694 |
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| Protein GI | 150396227 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.38875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00669682 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTTCTG CAGCGGAACA GCTCGCCTCG AACCTGAATT TTTCGACTTT CGCCAAGGCG
GAAGATCTGA AGAAGCGGCT CTGGTTCACC CTTGGTGCGC TTCTGGTCTA TCGACTTGGC
ACCTATATTC CGTTGCCGGG CCTTAATCCG GATGCATTCG CACAGGCGTT CCAGGGACAG
TCGGCGGGCA TTCTCGGCCT GTTCAACATG TTCTCGGGCG GCGCAGTCGA GCGCATGGCT
ATCTTCGCGC TCGGCATCAT GCCCTATATC TCCGCCTCCA TTATCGTGCA GCTCATGACC
TCGGTCGTTC CGGCGCTCGA GCAGCTGAAA AAGGAAGGCG AGCAGGGTCG TAAGGTCATC
AATCAGTACA CCCGCTACGG CACGGTGCTC CTGGGCGCGA TGCAGGCCTA CGGGATTGCC
GTCGGGCTCG AAAGCGGCAG CGGCCTCGTG AACGATCCGG GTTGGTTCTT CCGGATTTCG
ACCGTAATTT CGCTTCTCGG CGGCACGATG TTCCTGATGT GGCTTGGTGA GCAGATCACG
TCGCGCGGCA TCGGCAACGG CATTTCACTG ATCATCTTTG CCGGTATCGT CGCCGCTCTG
CCTTCGGCAC TTGCCGGCAC GCTTGAGTTG GGCCGCACCG GAGCGCTGTC GACGCCTCTG
ATCCTGGCGA TCATCGTCAT GGTCGTCGCC GTGATTGCGC TGATCGTCTT TGTCGAGCGC
GCGCAGCGCC GCCTGTTGAT CCAGTATCCG AAGCGTCAGG TCGGCAACCG GATGTTCCAA
GGCGACACGT CGCACCTGCC GTTGAAGCTC AACACATCCG GCGTGATCCC GGCGATCTTC
GCATCGTCGC TGCTCCTGCT GCCCGCTACG CTTGCCGGTT TCGCCAACAG CGCGACCATG
CCGGGTTGGG CGACGACGAT CGTCGGCGCG CTGGCGCACG GCCAGCCTCT CTACATGTTT
CTTTACGGTG CGATGATCGC GTTCTTTGCC TTCTTCTATA CGGCGATCGT GTTCAATCCG
AAGGACACAG CCGACAATCT AAAGAAGCAC GGCGGGTTTA TTCCAGGCAT TCGCCCAGGT
GAACGCACTG CCGAATACAT CGACTACGTA TTGACGCGTA TCACCGTCGT CGGCGCAATC
TACCTGATCT TCGTCTGCAT CCTGCCTGAG ATCCTCATCT CGCAGACCGG CGTGCCGTTC
TACCTTGGTG GTACGTCGCT TTTGATTGTT GTCAGCGTGA CCCTCGATAC GGTAGCACAG
ATCCAGGGTC ACCTCATCGC TCAGCAATAT GAGGGGCTGA TCAAGAAGTC GAAGCTGCGC
GGAGGAAAGA GGGGACGATG A
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| Protein sequence | MASAAEQLAS NLNFSTFAKA EDLKKRLWFT LGALLVYRLG TYIPLPGLNP DAFAQAFQGQ
SAGILGLFNM FSGGAVERMA IFALGIMPYI SASIIVQLMT SVVPALEQLK KEGEQGRKVI
NQYTRYGTVL LGAMQAYGIA VGLESGSGLV NDPGWFFRIS TVISLLGGTM FLMWLGEQIT
SRGIGNGISL IIFAGIVAAL PSALAGTLEL GRTGALSTPL ILAIIVMVVA VIALIVFVER
AQRRLLIQYP KRQVGNRMFQ GDTSHLPLKL NTSGVIPAIF ASSLLLLPAT LAGFANSATM
PGWATTIVGA LAHGQPLYMF LYGAMIAFFA FFYTAIVFNP KDTADNLKKH GGFIPGIRPG
ERTAEYIDYV LTRITVVGAI YLIFVCILPE ILISQTGVPF YLGGTSLLIV VSVTLDTVAQ
IQGHLIAQQY EGLIKKSKLR GGKRGR
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