| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0986 |
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| Symbol | rplC |
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| ID | 5321831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1068316 |
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| End bp | 1069002 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640789928 |
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| Product | 50S ribosomal protein L3 |
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| Protein accession | YP_001326674 |
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| Protein GI | 150396207 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0087] Ribosomal protein L3 |
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| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.191064 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0173239 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTTCAG GTGTGATTGC ACAGAAGGTG GGAATGACCC GCGTCTACAA CGACGCCGGC
GAGCATATCC CGGTAACAGT ATTGCGGCTG GAAAACTGCC AGGTAGTGGC CCAGCGCACG
GAAGAGAAGA ACGGTTATAC CGCAGTTCAG CTGGGGGCCG GCCGTTCGAA GGTCAAGAAT
ACGCCGAAGG CTATGCGCGG CCATTTCGCC GCTGCGAGCG TCGAGCCGAA GGCAAAGCTC
GTCGAGTTCC GCGTAAGCGC CGACAACCTG ATCGACATCG GCTCCGAGCT TACTGCGGGC
CATTTCGTCG CCGGGCAGCT CGTGGACGTT ACCGGCACCA CTATCGGTAA GGGTTTTGCC
GGCGCGATCA AGCGCCACAA CTTCGGCGGC CTGCGTGCAA CGCACGGCGT GTCCGTATCG
CACCGTTCGC ATGGTTCTAC CGGTTCCAAC CAGGACCCGG GCCGCGTTTG GAAGGGCAAG
CGCATGGCTG GTCACATGGG CCAGACGCGC GTCACCACGC AGAACCTCGA AGTCGTATCG
ACCGACGAAG ACCGCGGTCT TATCCTGGTC AAGGGTGCAG TTCCCGGCTC CAAGGGTTCC
TGGATCGTCG TCCGTGACGC CATCAAGTCG GGTACTCCGG AAGGCGCACC GCGCCCTGCC
GCAGTACGCG CCGCAGAATC CAAGTAA
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| Protein sequence | MRSGVIAQKV GMTRVYNDAG EHIPVTVLRL ENCQVVAQRT EEKNGYTAVQ LGAGRSKVKN
TPKAMRGHFA AASVEPKAKL VEFRVSADNL IDIGSELTAG HFVAGQLVDV TGTTIGKGFA
GAIKRHNFGG LRATHGVSVS HRSHGSTGSN QDPGRVWKGK RMAGHMGQTR VTTQNLEVVS
TDEDRGLILV KGAVPGSKGS WIVVRDAIKS GTPEGAPRPA AVRAAESK
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