| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0985 |
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| Symbol | rpsJ |
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| ID | 5321830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1067885 |
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| End bp | 1068193 |
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| Gene Length | 309 bp |
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| Protein Length | 102 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640789927 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_001326673 |
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| Protein GI | 150396206 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.547253 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0405609 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACGGCC AGAATATCCG CATCCGCCTC AAGGCGTTTG ATCACCGGAT CCTCGATGCC
TCCACGCGCG AAATCGTGTC GACGGCCAAG CGCACCGGTG CGAGTGTGCG CGGGCCCGTG
CCGCTTCCGA CCCGGATTGA GAAATTCACG GTCAACCGGT CGCCCCACGT CGACAAGAAG
AGCCGCGAAC AGTTCGAGAT GCGCACGCAC AAGCGTCTTC TCGATATTGT TGATCCGACC
CCGCAGACGG TAGACGCGCT GATGAAGCTC GACCTCGCCG CCGGCGTCGA CGTCGAGATC
AAGCTGTAA
|
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| Protein sequence | MNGQNIRIRL KAFDHRILDA STREIVSTAK RTGASVRGPV PLPTRIEKFT VNRSPHVDKK
SREQFEMRTH KRLLDIVDPT PQTVDALMKL DLAAGVDVEI KL
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